Click here to switch to the map view.

The map label for this gene is yczE [H]

Identifier: 49188240

GI number: 49188240

Start: 5137265

End: 5137891

Strand: Direct

Name: yczE [H]

Synonym: BAS5255

Alternate gene names: 49188240

Gene position: 5137265-5137891 (Clockwise)

Preceding gene: 49188234

Following gene: 49188244

Centisome position: 98.25

GC content: 34.61

Gene sequence:

>627_bases
ATGTTTCGATTCAAATTAGAATATATATTTTTCATTGGCGGTCTACTCATTCTCGCCATCGGTATTAATATGATGACGAC
CATTACTTCCTTTGGACTTAGCCCTTATGATTCCTTCTTTATTGCACTATATCAAAATTTCGGGATAAGTATCGGTTTTT
GGATTTTCATGATTAACTTCGCTTTTACACTTATCGTACTCTTTTGGAATAAAAAAGAAATAACAATTGGTACTATCGTA
ACGATGGTTCTTATTTCTCTTTTTGTTGATTGGATTGGTTCCACTACAACTATTATGGATGCTATCCGCTCTCTTCCAAA
ATATATAACACTTATTTGCGGAAATCTATTCGTTGGAGCTGGAATTGGTCTTTACGTCTCTACAAATCTTTGCGCAGCGC
CTCAAGAAGCTTTCGTTTTAACGGTTGCTGAGAAGAAAAAATGGACGTTTAGAAGAACAGAGATTTCATTAGCTTTTTTA
TTTTTAACGTTAAGTTTCTTATTAGACGGGCCCATTTATTTCGGTACAATCATCTTATCCTTTACAACTGGCTGGATTAT
TCAAGCATTTATTCAAGTTGGCACGCACAGTTTAAATAGAAAAGAACCTATTAAGCAAGCCGCTTAA

Upstream 100 bases:

>100_bases
ATCTCATTTTCCCCTTCCCTGCAAAAATTCTCCCTTGACCTGGTAAGCTTTCCACAATATATCCTTTCCTAGCAAATACA
TTTTGAAAGGATATACAACT

Downstream 100 bases:

>100_bases
TAGGTTCTTTATTAGTGGAGATACTACTTTGCATCCCCTTCAATTCGATAGTTTGCTTTCAAACAATCTATTTCTTCATA
CCCTTGCAACGTATGTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MFRFKLEYIFFIGGLLILAIGINMMTTITSFGLSPYDSFFIALYQNFGISIGFWIFMINFAFTLIVLFWNKKEITIGTIV
TMVLISLFVDWIGSTTTIMDAIRSLPKYITLICGNLFVGAGIGLYVSTNLCAAPQEAFVLTVAEKKKWTFRRTEISLAFL
FLTLSFLLDGPIYFGTIILSFTTGWIIQAFIQVGTHSLNRKEPIKQAA

Sequences:

>Translated_208_residues
MFRFKLEYIFFIGGLLILAIGINMMTTITSFGLSPYDSFFIALYQNFGISIGFWIFMINFAFTLIVLFWNKKEITIGTIV
TMVLISLFVDWIGSTTTIMDAIRSLPKYITLICGNLFVGAGIGLYVSTNLCAAPQEAFVLTVAEKKKWTFRRTEISLAFL
FLTLSFLLDGPIYFGTIILSFTTGWIIQAFIQVGTHSLNRKEPIKQAA
>Mature_208_residues
MFRFKLEYIFFIGGLLILAIGINMMTTITSFGLSPYDSFFIALYQNFGISIGFWIFMINFAFTLIVLFWNKKEITIGTIV
TMVLISLFVDWIGSTTTIMDAIRSLPKYITLICGNLFVGAGIGLYVSTNLCAAPQEAFVLTVAEKKKWTFRRTEISLAFL
FLTLSFLLDGPIYFGTIILSFTTGWIIQAFIQVGTHSLNRKEPIKQAA

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740 [H]

Pfam domain/function: PF02588 DUF161 [H]

EC number: NA

Molecular weight: Translated: 23445; Mature: 23445

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFKLEYIFFIGGLLILAIGINMMTTITSFGLSPYDSFFIALYQNFGISIGFWIFMINF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AFTLIVLFWNKKEITIGTIVTMVLISLFVDWIGSTTTIMDAIRSLPKYITLICGNLFVGA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGLYVSTNLCAAPQEAFVLTVAEKKKWTFRRTEISLAFLFLTLSFLLDGPIYFGTIILS
CCCEEEECCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FTTGWIIQAFIQVGTHSLNRKEPIKQAA
HHHHHHHHHHHHHCCCCCCCCCCHHCCC
>Mature Secondary Structure
MFRFKLEYIFFIGGLLILAIGINMMTTITSFGLSPYDSFFIALYQNFGISIGFWIFMINF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AFTLIVLFWNKKEITIGTIVTMVLISLFVDWIGSTTTIMDAIRSLPKYITLICGNLFVGA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGLYVSTNLCAAPQEAFVLTVAEKKKWTFRRTEISLAFLFLTLSFLLDGPIYFGTIILS
CCCEEEECCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FTTGWIIQAFIQVGTHSLNRKEPIKQAA
HHHHHHHHHHHHHCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]