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The map label for this gene is 49188185

Identifier: 49188185

GI number: 49188185

Start: 5082636

End: 5083277

Strand: Reverse

Name: 49188185

Synonym: BAS5199

Alternate gene names: NA

Gene position: 5083277-5082636 (Counterclockwise)

Preceding gene: 49188186

Following gene: 49188184

Centisome position: 97.22

GC content: 31.62

Gene sequence:

>642_bases
ATGCACGCAGAAAAATTAGGAAGTGAAATTAAGAAAATTAGGGTGATGAGAGGATTAACACAAAAACAGTTATCCGAGAA
TATATGTCACCAATCGGAAGTGAGCCGAATTGAATCGGGCGCGGTATACCCAAGTATGGACATATTACAAGGTATTGCAG
CAAAGTTACAAGTTCCCATTATCCATTTTTATGAGGTACTTATCTATTCTGACATTGAAAGGAATAAGCAGCTAAAAGAC
CGAATTATTATGCTTTGTAAGCAAAAGAAATATAAAGAAATTTATAATAAAGTATGGAATGAGTTGAAAAAAGAAGAATA
TCATCCTGAGCTTCAGCAGTTTCTTCAATGGCAATATCATGTGGCTGCTTACATATTGAAAAAAATTGATTACGAATATT
GCATTTTAGAATTAAAGAAATTGCTCAATCAACAATTGGCAGGAATAGATGTATATCAGAACCTGTATATTGAAAACGCA
ATTGCAAACATTTACGCTGAAAATGGCCATTTTAAGAAGAGTATTGAGTTATATGAAAATATATTAAAGCAATTAGAAGT
ATTACATGATAATAAAGAGTTTGATGTGAAGGTGAGACATAATCATGCAAAAGCATTATACTTGGACAATCAATACGAAT
AA

Upstream 100 bases:

>100_bases
TATTATGCATTATTTCATATCAAAAATTGTCGAATTCACATTATTGTAGTGGTATGACAACTCGAAAAATTAGATTGTTA
TAGTGGGATGGTGAGTAAGT

Downstream 100 bases:

>100_bases
GCGCTTTGTCATGCAAATAAAGCTATTGAACTATCGTGTCAAATTAATAGTATGACATTGATTGGACAGTTATACTATCG
AAAAGTTGAATGCCTAGAAA

Product: transcriptional regulator, PlcR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PlcR; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Activator PlcR; Xre Family Transcriptional Regulator; Transcriptional Activator; Site-Specific Tyrosine Recombinase XerS; Transcriptional Regulator PlcR-Like

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIIMLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYILKKIDYEYCILELKKLLNQQLAGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYE

Sequences:

>Translated_213_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIIMLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYILKKIDYEYCILELKKLLNQQLAGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYE
>Mature_213_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIIMLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYILKKIDYEYCILELKKLLNQQLAGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25418; Mature: 25418

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
IHFYEVLIYSDIERNKQLKDRIIMLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VAAYILKKIDYEYCILELKKLLNQQLAGIDVYQNLYIENAIANIYAENGHFKKSIELYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYE
HHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
IHFYEVLIYSDIERNKQLKDRIIMLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VAAYILKKIDYEYCILELKKLLNQQLAGIDVYQNLYIENAIANIYAENGHFKKSIELYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYE
HHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA