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The map label for this gene is mmgC [H]

Identifier: 49188177

GI number: 49188177

Start: 5071365

End: 5072495

Strand: Reverse

Name: mmgC [H]

Synonym: BAS5191

Alternate gene names: 49188177

Gene position: 5072495-5071365 (Counterclockwise)

Preceding gene: 49188178

Following gene: 49188176

Centisome position: 97.01

GC content: 41.38

Gene sequence:

>1131_bases
ATGAACTTTCGTTTTAATGAAGAGCAACAGATGATGAGGAAAATGGTTCGAGATTTTGCGCAGAAGGAAATAGCTCCCTT
TGTTCCTAGTATGGAACAAGGGGTGTTCCCAACAGAGATTTTGCAGAAGATGGGTGAGCTTGGATTAATGGGAATTCCAG
CGCCTGCAAAATACGGCGGTTCAGAAATGGATTTTATCTCTTACATTTTAGCAATTGAAGAAATTTCAAAGGTAAGCGCA
ACAGTTGGTGTAATTTTAGCTGTACATACGTCAGTTGGGATGAACCCAATTTTATATTTTGGAACAGAAGAACAGAAAGA
GAAATACGTTTCTAAACTTGCGACTGGTGAATATTTAGGCGCATTTGCATTAACAGAACCAAATGCAGGATCGGATGCAG
GGAGTTTGAAATCAAGAGCTGTAAAGAAAGGCGATCACTACATTATTAATGGGTCGAAAGTATTTATTACAAATGGCGGT
GAAGCAAGTACATACATTGTATTCGCCTCTACAAATCCAGAGGCAGGAAAAAGTGGGATTTCTGCATTTATAGTAGAGAA
AGATACACCAGGCTTAATTATTGGAAAAGATGAGCATAAAATGGGACTTCTCGGTTCTCGCACGGTACAACTTACGTTCG
AGGATATGAAAGTGCCGGCTGAGAATTTACTTGGTGAAGAAGGACAAGGATTTAAGGTTGCGATGGCGAATTTAGATGTT
GGACGAATTGGAATTGGAGCGCAAGCACTAGGAATTGCTGAAGCGGCGCTTGCATGTGCAATTGATTATGCGAAAGAACG
TGAGCAATTCGGAAAACCAATTGCGGAGCAGCAAGGGATTGGCTTCAAACTTGCCGATATGGCTACTAGTGTAGAAGCGG
CGCGATTACTTGTATATAGGGCGGCATCGCTAAGAGCGCAAGGATTACCATGTGGTAAGGAAGCATCTATTGCGAAATTA
TTCGCTTCTAAAACAGCTGTTGAAGTTGCGATTGAAGCGGTGCAAGTATTTGGGGGATACGGTTATACGAAGGACTATCC
AGTAGAAAGATTTTTCCGTGATGCGAAAATCACGCAAATATATGAAGGAACGAGCGAAATACAGAAACTTGTTATTAGCC
GAGCTTTGTAA

Upstream 100 bases:

>100_bases
GGTCGTGGTTTCTACGTTTACGAATAAAATTCCCCTTTGTTACAAAATAGTGGTCTTACCAAATTGTTAAAAGGATATAT
AGCAAATGGAGGCGGGGTAT

Downstream 100 bases:

>100_bases
AAGCACAAGGGGGAGACGGGTATGCATTTTAAACTATCAGAAGAACATGAAATGATAAGAAAAATGGTTCGAGACTTTGC
TAAGAATGAAGTAGCACCGA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPTEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSA
TVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLGAFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGG
EASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDV
GRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEASIAKL
FASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRAL

Sequences:

>Translated_376_residues
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPTEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSA
TVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLGAFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGG
EASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDV
GRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEASIAKL
FASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRAL
>Mature_376_residues
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPTEILQKMGELGLMGIPAPAKYGGSEMDFISYILAIEEISKVSA
TVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLGAFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGG
EASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDV
GRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEASIAKL
FASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRAL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=368, Percent_Identity=49.1847826086957, Blast_Score=380, Evalue=1e-105,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=46.3806970509383, Blast_Score=334, Evalue=1e-91,
Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=42.4403183023873, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI226958414, Length=340, Percent_Identity=44.4117647058823, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI4557231, Length=378, Percent_Identity=42.8571428571429, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI187960098, Length=378, Percent_Identity=42.8571428571429, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=40.3743315508021, Blast_Score=282, Evalue=3e-76,
Organism=Homo sapiens, GI21361497, Length=350, Percent_Identity=43.7142857142857, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI76496475, Length=341, Percent_Identity=40.7624633431085, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=38.4210526315789, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=37.3333333333333, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=32.6259946949602, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI7669494, Length=363, Percent_Identity=32.7823691460055, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI211971008, Length=297, Percent_Identity=32.996632996633, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI48976061, Length=293, Percent_Identity=33.1058020477816, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI38505218, Length=369, Percent_Identity=27.3712737127371, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI218563752, Length=271, Percent_Identity=26.5682656826568, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=32.8981723237598, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1786223, Length=378, Percent_Identity=29.6296296296296, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI87081702, Length=339, Percent_Identity=27.1386430678466, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082384, Length=301, Percent_Identity=27.2425249169435, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=40.4825737265416, Blast_Score=305, Evalue=4e-83,
Organism=Caenorhabditis elegans, GI17538396, Length=377, Percent_Identity=38.9920424403183, Blast_Score=304, Evalue=6e-83,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=42.4731182795699, Blast_Score=303, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=44.2408376963351, Blast_Score=303, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI17534899, Length=383, Percent_Identity=44.3864229765013, Blast_Score=301, Evalue=5e-82,
Organism=Caenorhabditis elegans, GI17570075, Length=382, Percent_Identity=41.0994764397906, Blast_Score=292, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=49.2805755395683, Blast_Score=262, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17533517, Length=365, Percent_Identity=39.1780821917808, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=37.5328083989501, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=31.9148936170213, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=37.5, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=40.6926406926407, Blast_Score=197, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=37.1747211895911, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17551932, Length=375, Percent_Identity=31.2, Blast_Score=187, Evalue=9e-48,
Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=31.2, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=34.3096234309623, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17562446, Length=294, Percent_Identity=31.2925170068027, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17531913, Length=191, Percent_Identity=31.9371727748691, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI86563381, Length=315, Percent_Identity=28.2539682539683, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=315, Percent_Identity=28.2539682539683, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21356377, Length=370, Percent_Identity=50, Blast_Score=381, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=45.5764075067024, Blast_Score=343, Evalue=1e-94,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=44.2359249329759, Blast_Score=327, Evalue=7e-90,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=43.6842105263158, Blast_Score=308, Evalue=4e-84,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=39.1076115485564, Blast_Score=281, Evalue=4e-76,
Organism=Drosophila melanogaster, GI281363737, Length=347, Percent_Identity=41.4985590778098, Blast_Score=247, Evalue=8e-66,
Organism=Drosophila melanogaster, GI19920834, Length=378, Percent_Identity=32.010582010582, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI221473076, Length=309, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45550141, Length=309, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281365206, Length=336, Percent_Identity=22.9166666666667, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585193, Length=336, Percent_Identity=22.9166666666667, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585195, Length=336, Percent_Identity=22.9166666666667, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585191, Length=336, Percent_Identity=22.9166666666667, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40534; Mature: 40534

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPTEILQKMGELGLMGIPAPAKYGG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCEECCCCCCCCCC
SEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLG
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHHHHCCHHHC
AFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI
EEEEECCCCCCCCHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCC
SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDV
EEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEHHHCCCHHHHCCCCCCCEEEEEECCCC
GRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHH
AASLRAQGLPCGKEASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YEGTSEIQKLVISRAL
HCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPTEILQKMGELGLMGIPAPAKYGG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCEECCCCCCCCCC
SEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLG
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHHHHCCHHHC
AFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGI
EEEEECCCCCCCCHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCC
SAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDV
EEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEHHHCCCHHHHCCCCCCCEEEEEECCCC
GRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAEQQGIGFKLADMATSVEAARLLVYR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHH
AASLRAQGLPCGKEASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YEGTSEIQKLVISRAL
HCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]