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The map label for this gene is ywrF [H]

Identifier: 49188157

GI number: 49188157

Start: 5052345

End: 5052956

Strand: Direct

Name: ywrF [H]

Synonym: BAS5171

Alternate gene names: 49188157

Gene position: 5052345-5052956 (Clockwise)

Preceding gene: 49188156

Following gene: 49188172

Centisome position: 96.63

GC content: 41.01

Gene sequence:

>612_bases
ATGTTATCCATTAATCCAAATGAACAAACAGAAAAAGAGAATTACAAATTACTTACAGGAAGTATTATTCCACGCCCTGT
CGCATTCGTTACTTCTGTAACAAAAGACGGCGTATTAAATGGAGCACCATATAGTTATTTCAATATTGTCGCTGCTAATC
CGCCACTTATCTCAGTTTCTGTACAACGAAAAGCTGGAGAAAGAAAAGACACTTCTCGAAACGCAATTGAAAAAGGGGAA
TTTGTCGTACATATCTCTGATGAATCATATGTAGCGGCAATTAACGAAACAGCAGCAAATCTCCCGTCAAACGAAAGTGA
AATTGAACTAGCAAAATTAACACCAATTGAAAGTGATGTCATCTCCGTTCCAGGTGTAAAAGAAGCAAACATTCGAATGG
AATGCGTACTAGAACGCGCAATCCCCCTTGGCGGAACAGAAGACTCACCAGCTTGCGATCTACTAATTGGACGCGTCGTT
CGTTTCCACGTCGCAGAACACCTATACGAAAATGGCCGCATTCATGCAGAAGGACTAAAACCAGTAAGCCGCCTAGCAGG
ACATAACTACGCAAAACTAGGAGAACAATTTGAATTAGTGAGGCCACTCTAA

Upstream 100 bases:

>100_bases
TTCTTTTTATGTAATAAAAATATTATTTTCAGCAGGAGTTTTCCACTAACATCTTGTAAACAAACAATAAGTCGTCATAT
TTAGAAAGGGGATTTCAAGC

Downstream 100 bases:

>100_bases
AAGCGGAAGCGGCTCGTTCAGAATCGCAGGGCATTGGAGCTCTCGATCTTGAAGCGCTTTTTGCCTCGCAGGAAGAAGCG
AAGCCACCGACCATTCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLSINPNEQTEKENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGE
FVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDVISVPGVKEANIRMECVLERAIPLGGTEDSPACDLLIGRVV
RFHVAEHLYENGRIHAEGLKPVSRLAGHNYAKLGEQFELVRPL

Sequences:

>Translated_203_residues
MLSINPNEQTEKENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGE
FVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDVISVPGVKEANIRMECVLERAIPLGGTEDSPACDLLIGRVV
RFHVAEHLYENGRIHAEGLKPVSRLAGHNYAKLGEQFELVRPL
>Mature_203_residues
MLSINPNEQTEKENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGE
FVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDVISVPGVKEANIRMECVLERAIPLGGTEDSPACDLLIGRVV
RFHVAEHLYENGRIHAEGLKPVSRLAGHNYAKLGEQFELVRPL

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22173; Mature: 22173

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSINPNEQTEKENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVS
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEE
VQRKAGERKDTSRNAIEKGEFVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDV
ECCCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECHHHHCCCCCCCCEEEEEECCCCCCE
ISVPGVKEANIRMECVLERAIPLGGTEDSPACDLLIGRVVRFHVAEHLYENGRIHAEGLK
EECCCCCCCCCHHEEHEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
PVSRLAGHNYAKLGEQFELVRPL
HHHHHCCCCHHHHCCHHHHCCCC
>Mature Secondary Structure
MLSINPNEQTEKENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVS
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEE
VQRKAGERKDTSRNAIEKGEFVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDV
ECCCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECHHHHCCCCCCCCEEEEEECCCCCCE
ISVPGVKEANIRMECVLERAIPLGGTEDSPACDLLIGRVVRFHVAEHLYENGRIHAEGLK
EECCCCCCCCCHHEEHEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
PVSRLAGHNYAKLGEQFELVRPL
HHHHHCCCCHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]