Click here to switch to the map view.

The map label for this gene is 49188118

Identifier: 49188118

GI number: 49188118

Start: 5017111

End: 5017815

Strand: Reverse

Name: 49188118

Synonym: BAS5132

Alternate gene names: NA

Gene position: 5017815-5017111 (Counterclockwise)

Preceding gene: 49188119

Following gene: 49188117

Centisome position: 95.97

GC content: 31.91

Gene sequence:

>705_bases
ATGACATTTTCAATGAGACGTGTATCAGCTATTTTTAGAAAAGAGGTACAAGATTTTAAGACAAATTCACAAGTGTTGCT
AATGGCATCTTTACCAATTATATTTGCATTCATATTTAGCAGGTTTGGGCAAGGGAGTGCAGGAGTTGGTATTATTACTT
TAATGGCCTTTCTATTCGTTGCAGGCTTTGTACAATCAATGGTAATTGCAGAAGAGAAAGAAAAACATACGTTACGTGTG
TTAATGCTATCACCAGCTTCTTCTGTTGAAGTCCTTCTTGGAAAAAGTATATTAACAGCATGTTTAACGCTAGGTATCTC
TATTATAAACTTATTCATTTTAGATCAATTAAGTGGAAATTTCTTATTACTAGCATTTGTTTTCTTATGTGGAACAATTC
TATTTACTTTAATTGGTACAATGATTGGATTACTAGCTGATTCTGTCCCACAAACATCACTAATTGGAATGCCAATATTA
ATGACGATGTATTTAGCTGTGCAATTTGAACCAATGGTTGAGAATAAAGTAATTAAGACAATAATTAGTTATCTTCCAAC
ATCTCATCTTGAAAAAGCAATTAAAAGCTTAGTAGAGGGCGCTGGGTTTAGTAGTATTAGTGGACATATGATAAATGTTG
GAGCTTGGCTTATTATTTCACTTATTGCATGTTTAATCGTATATAAAAAGAAACAATTAGACTAA

Upstream 100 bases:

>100_bases
GCATTTCAGAATGGATGAAAAAAGGAGAACTATTATCCATTCATTCTTATGAGCCAACGTTAGGTGATATCTTTATTGAA
GTTACTGGGAGGGGATTATA

Downstream 100 bases:

>100_bases
AAACTGAGCCGAAGCGCTCAGTTTTTTCTTTTTTCTATCATTTCCTCGGAAATTTTGCAATTCCTATACATATTTTTACA
GATTTTGTCGAAAAGTAATT

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Permease; ABC-2 Type Transport System Permease; ABC Transporter Permease Component

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTFSMRRVSAIFRKEVQDFKTNSQVLLMASLPIIFAFIFSRFGQGSAGVGIITLMAFLFVAGFVQSMVIAEEKEKHTLRV
LMLSPASSVEVLLGKSILTACLTLGISIINLFILDQLSGNFLLLAFVFLCGTILFTLIGTMIGLLADSVPQTSLIGMPIL
MTMYLAVQFEPMVENKVIKTIISYLPTSHLEKAIKSLVEGAGFSSISGHMINVGAWLIISLIACLIVYKKKQLD

Sequences:

>Translated_234_residues
MTFSMRRVSAIFRKEVQDFKTNSQVLLMASLPIIFAFIFSRFGQGSAGVGIITLMAFLFVAGFVQSMVIAEEKEKHTLRV
LMLSPASSVEVLLGKSILTACLTLGISIINLFILDQLSGNFLLLAFVFLCGTILFTLIGTMIGLLADSVPQTSLIGMPIL
MTMYLAVQFEPMVENKVIKTIISYLPTSHLEKAIKSLVEGAGFSSISGHMINVGAWLIISLIACLIVYKKKQLD
>Mature_233_residues
TFSMRRVSAIFRKEVQDFKTNSQVLLMASLPIIFAFIFSRFGQGSAGVGIITLMAFLFVAGFVQSMVIAEEKEKHTLRVL
MLSPASSVEVLLGKSILTACLTLGISIINLFILDQLSGNFLLLAFVFLCGTILFTLIGTMIGLLADSVPQTSLIGMPILM
TMYLAVQFEPMVENKVIKTIISYLPTSHLEKAIKSLVEGAGFSSISGHMINVGAWLIISLIACLIVYKKKQLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25578; Mature: 25447

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSMRRVSAIFRKEVQDFKTNSQVLLMASLPIIFAFIFSRFGQGSAGVGIITLMAFLFV
CCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AGFVQSMVIAEEKEKHTLRVLMLSPASSVEVLLGKSILTACLTLGISIINLFILDQLSGN
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FLLLAFVFLCGTILFTLIGTMIGLLADSVPQTSLIGMPILMTMYLAVQFEPMVENKVIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IISYLPTSHLEKAIKSLVEGAGFSSISGHMINVGAWLIISLIACLIVYKKKQLD
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFSMRRVSAIFRKEVQDFKTNSQVLLMASLPIIFAFIFSRFGQGSAGVGIITLMAFLFV
CCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AGFVQSMVIAEEKEKHTLRVLMLSPASSVEVLLGKSILTACLTLGISIINLFILDQLSGN
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FLLLAFVFLCGTILFTLIGTMIGLLADSVPQTSLIGMPILMTMYLAVQFEPMVENKVIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IISYLPTSHLEKAIKSLVEGAGFSSISGHMINVGAWLIISLIACLIVYKKKQLD
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA