Click here to switch to the map view.

The map label for this gene is 49188087

Identifier: 49188087

GI number: 49188087

Start: 4981630

End: 4982136

Strand: Direct

Name: 49188087

Synonym: BAS5101

Alternate gene names: NA

Gene position: 4981630-4982136 (Clockwise)

Preceding gene: 49188085

Following gene: 49188093

Centisome position: 95.28

GC content: 32.94

Gene sequence:

>507_bases
ATGAATGACGAAAATGCTATTATTATTTCTAATTCTACAATGATGCTAGAGCCTTACAAGCATCCTTCTTATTGCACAAA
AATGATCGACAGTAGTGGGAACCATCTTTACTCCTGTCAAACCGCTCTCCAGCTCATAAAGAAATCTTGTCTAACCAATG
TTCACACTACTTATCAAGGCAGACGTAAAGCAGTTCAAACAAACTTTAATTTCAAACAAAATGTCCCAATTCCAATTAAT
CATAGAGAATATATTTGTGCTTTCCCAACAGAGTCTCCTTCTTCTCCAAACTGTATATGGCTATTTTATAATCATATAGA
TGACATAGAATTTTTCAAACAGAGTAAAAAAGCTACTATTCATTTTTCAAATGGCACGACTACAACCATACATATCAGTC
CCCATAGGTTAAAACAACAATTATTAAAAGCCGGATATGTATTATCACGTATGAACATGCAAGATTCACTACAGTTTAAA
AACCTCTTATTACATTTACTACCTTAA

Upstream 100 bases:

>100_bases
AAAATTTACAATATGAAATAAAAGATTAACAATTAATTTACTTAATTCGTATATAATTATATTGAGAATTATTATCATTT
ATAAAGGGGGAATTAAATTT

Downstream 100 bases:

>100_bases
CAAAATAAGTAGAATGGAAAGCAATATCCCTTGCCTTCCATTCTTATGATACTATTTATCCTCTTAAGCTATTTCGCATT
TTCTCAAGCGCCTGCCGATA

Product: ComK-like transcription factor

Products: NA

Alternate protein names: Competence Transcription Factor ComK; Competence Transcription Factor K; Competence Transcription Factor

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNDENAIIISNSTMMLEPYKHPSYCTKMIDSSGNHLYSCQTALQLIKKSCLTNVHTTYQGRRKAVQTNFNFKQNVPIPIN
HREYICAFPTESPSSPNCIWLFYNHIDDIEFFKQSKKATIHFSNGTTTTIHISPHRLKQQLLKAGYVLSRMNMQDSLQFK
NLLLHLLP

Sequences:

>Translated_168_residues
MNDENAIIISNSTMMLEPYKHPSYCTKMIDSSGNHLYSCQTALQLIKKSCLTNVHTTYQGRRKAVQTNFNFKQNVPIPIN
HREYICAFPTESPSSPNCIWLFYNHIDDIEFFKQSKKATIHFSNGTTTTIHISPHRLKQQLLKAGYVLSRMNMQDSLQFK
NLLLHLLP
>Mature_168_residues
MNDENAIIISNSTMMLEPYKHPSYCTKMIDSSGNHLYSCQTALQLIKKSCLTNVHTTYQGRRKAVQTNFNFKQNVPIPIN
HREYICAFPTESPSSPNCIWLFYNHIDDIEFFKQSKKATIHFSNGTTTTIHISPHRLKQQLLKAGYVLSRMNMQDSLQFK
NLLLHLLP

Specific function: Unknown

COG id: COG4903

COG function: function code K; Genetic competence transcription factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19421; Mature: 19421

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDENAIIISNSTMMLEPYKHPSYCTKMIDSSGNHLYSCQTALQLIKKSCLTNVHTTYQG
CCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC
RRKAVQTNFNFKQNVPIPINHREYICAFPTESPSSPNCIWLFYNHIDDIEFFKQSKKATI
CHHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCEEE
HFSNGTTTTIHISPHRLKQQLLKAGYVLSRMNMQDSLQFKNLLLHLLP
EECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDENAIIISNSTMMLEPYKHPSYCTKMIDSSGNHLYSCQTALQLIKKSCLTNVHTTYQG
CCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC
RRKAVQTNFNFKQNVPIPINHREYICAFPTESPSSPNCIWLFYNHIDDIEFFKQSKKATI
CHHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCEEE
HFSNGTTTTIHISPHRLKQQLLKAGYVLSRMNMQDSLQFKNLLLHLLP
EECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA