Click here to switch to the map view.

The map label for this gene is 49188080

Identifier: 49188080

GI number: 49188080

Start: 4974743

End: 4975231

Strand: Reverse

Name: 49188080

Synonym: BAS5094

Alternate gene names: NA

Gene position: 4975231-4974743 (Counterclockwise)

Preceding gene: 49188083

Following gene: 49188079

Centisome position: 95.15

GC content: 37.22

Gene sequence:

>489_bases
TTGTCAGATTTACAATCGAAGTTTGGTAGCGGTATGAACAAATTGCAAGAGGGAATAGAGCAAGGGAAGATGAAATTACA
AGTAGCTCAAGAGGTTGCGCAATTAAAGAAAATTACGCAAGAGAAACTACAGGCGAAAACGGAAATTTTGCTGGAACTTG
GTCAAACGACATATATGCAACTCCGCAATGATGAAGTTCGAGTAGATATGTTAAAAAATATTATAGAACCAGTACAAGAG
CTGGATGTAGCTATTTATAATACGCGTAAGCAAATAGCTAATTTACAGAATCAAGGACAGAAAGGGCAATGTAGTTGTGG
CGGCCCATTATCAGTAAATGATAAGTTTTGTGGACAGTGTGGGAAAGAAAATGAGTTACTCCTTCAATCAAAAAATGATG
AAAATGAATCATGTACTTCATGTGGTGAACAAATTGCAACAGAGGCTACATTCTGTCCAGTTTGTGGTATGAAGCAAAGT
AAGGAGTGA

Upstream 100 bases:

>100_bases
AACAGAAAAAATGAAATTTAGATTACATTACTTGAAAATCATGGTAATATATAAAATGTTAATTTTGTATATTACTATAT
ATTTATGGATGGATTAAGTT

Downstream 100 bases:

>100_bases
GGAACATGTATTGTAAAACTTGTGGTTTAGAACAATCGGATGTAGCGAATTATTGTACACATGATGGATCAAGTACAGGT
AGTGTAGAAAGTGAAGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSDLQSKFGSGMNKLQEGIEQGKMKLQVAQEVAQLKKITQEKLQAKTEILLELGQTTYMQLRNDEVRVDMLKNIIEPVQE
LDVAIYNTRKQIANLQNQGQKGQCSCGGPLSVNDKFCGQCGKENELLLQSKNDENESCTSCGEQIATEATFCPVCGMKQS
KE

Sequences:

>Translated_162_residues
MSDLQSKFGSGMNKLQEGIEQGKMKLQVAQEVAQLKKITQEKLQAKTEILLELGQTTYMQLRNDEVRVDMLKNIIEPVQE
LDVAIYNTRKQIANLQNQGQKGQCSCGGPLSVNDKFCGQCGKENELLLQSKNDENESCTSCGEQIATEATFCPVCGMKQS
KE
>Mature_161_residues
SDLQSKFGSGMNKLQEGIEQGKMKLQVAQEVAQLKKITQEKLQAKTEILLELGQTTYMQLRNDEVRVDMLKNIIEPVQEL
DVAIYNTRKQIANLQNQGQKGQCSCGGPLSVNDKFCGQCGKENELLLQSKNDENESCTSCGEQIATEATFCPVCGMKQSK
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18010; Mature: 17879

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLQSKFGSGMNKLQEGIEQGKMKLQVAQEVAQLKKITQEKLQAKTEILLELGQTTYMQ
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNDEVRVDMLKNIIEPVQELDVAIYNTRKQIANLQNQGQKGQCSCGGPLSVNDKFCGQC
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
GKENELLLQSKNDENESCTSCGEQIATEATFCPVCGMKQSKE
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDLQSKFGSGMNKLQEGIEQGKMKLQVAQEVAQLKKITQEKLQAKTEILLELGQTTYMQ
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNDEVRVDMLKNIIEPVQELDVAIYNTRKQIANLQNQGQKGQCSCGGPLSVNDKFCGQC
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
GKENELLLQSKNDENESCTSCGEQIATEATFCPVCGMKQSKE
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA