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The map label for this gene is ydaM [H]

Identifier: 49188073

GI number: 49188073

Start: 4966550

End: 4967206

Strand: Direct

Name: ydaM [H]

Synonym: BAS5087

Alternate gene names: 49188073

Gene position: 4966550-4967206 (Clockwise)

Preceding gene: 49188072

Following gene: 49188074

Centisome position: 94.99

GC content: 39.12

Gene sequence:

>657_bases
ATGATGACGCTCGTTATACTTCTTTTATTCCTCCTGTTTTGCGTACTTGTTTTTTGGATTAGCATCACATTTTCGATTAA
GTATGTACTTATTTTTACAGCCTTTCTATTCTCTGGCTTACTTGTTTACTATTCCTTCTTAACACTCGCAGGTCTAGTTC
ACCGAAATAGTAAACGAAAAGATCGTACGCTAGAACATTACCCAAGCGTCGATATTTTAATACCAGCTCACAATGAAGGG
GTCGTTATTAAAGATACTTTAGAGGCGATGGCGAAGATTGAATATCCAGGCAAGCTAACTGTTTATTTATTAAACGATAA
CTCGCAAGATGAGACACCTGAAATTGGTGACGATTTTGACAAAGCTTATGCTCATATTCGTCACATTCGTGTTCCACCTG
GTGAACCAAAAGGAAAATCACGTGTATTAAACTATGGCCTTAGTATTTCAGATGGTGAATACTTCTGTGTTTATGATGCA
GATAACCAGCCTGAACCACATGCACTACGAATGCTCGTAGAACACGCTGAAACAACCGAGGATGCTGTTGGAGCTGTTGG
ACATGTTCGTACTGTAAATGAAAACAGAAACTGGCTAACACGAATGATTTCGTTAGAATTTCAAATCTTCCAGCTCCTTA
TGCAATCCGGACGCTGA

Upstream 100 bases:

>100_bases
ACCGCCTAAAGCCAAAAATGGAGCAATGGCTTGCTGCTGAAGCGATCCAAGATATAAAAATTTCACGCGAGCAAATTGGG
AACAAAGGACAGACGTTATT

Downstream 100 bases:

>100_bases
ATTAACATTACGAATTACACAAAAAGGCTATCTTTTACCAATCGTTCCAGAATCGGTTACATGGGAACAAGAACCTGAAC
ATTTAAAAATCCTTATTAAG

Product: N-acetylglucosaminyltransferase, N-terminus (glycosyl transferase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNENRNWLTRMISLEFQIFQLLMQSGR

Sequences:

>Translated_218_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNENRNWLTRMISLEFQIFQLLMQSGR
>Mature_218_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNENRNWLTRMISLEFQIFQLLMQSGR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 24927; Mature: 24927

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRTLEHYPSVDILIPAHNEGVVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFD
CCHHHHCCCEEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH
KAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDADNQPEPHALRMLVEHAETTE
HHHHHHHHEECCCCCCCCHHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHH
DAVGAVGHVRTVNENRNWLTRMISLEFQIFQLLMQSGR
HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRTLEHYPSVDILIPAHNEGVVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFD
CCHHHHCCCEEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH
KAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDADNQPEPHALRMLVEHAETTE
HHHHHHHHEECCCCCCCCHHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHH
DAVGAVGHVRTVNENRNWLTRMISLEFQIFQLLMQSGR
HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]