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The map label for this gene is licB [H]

Identifier: 49188050

GI number: 49188050

Start: 4938566

End: 4938868

Strand: Reverse

Name: licB [H]

Synonym: BAS5064

Alternate gene names: 49188050

Gene position: 4938868-4938566 (Counterclockwise)

Preceding gene: 49188054

Following gene: 49188049

Centisome position: 94.46

GC content: 40.59

Gene sequence:

>303_bases
ATGAATATTTTGCTTTGCTGTGCAGCGGGAATGTCTTCCAGCTTGATTGTTACAAAAATGGAGAAAGCAGCAGAGGCAAG
AGGAATAGAGGTAAAGATTTGGGCTGTATCAGGTTCTGAAGTAAATAGTCACATTGATGAAGCGGATGTACTGCTACTTG
GGCCACAAGTACGTTATTTATTACCGAAAATGAAAGAATTATGTAAGGGGAAAGGAGTACCTGTTGATGTAATTCAATCC
GTCCATTACGGACTTTGTAATGGGGAAGCTATCTTGCAAGCAGCGTTGTCAATGAAACCATGA

Upstream 100 bases:

>100_bases
CTCGGCATACAGTTAGAAATCTAGACATATATATTTGTAACCTAGTGGTGGTAAGGGATGCACCATAATTTAGGTTTAGA
AAAAGGGGGAGGGAAGCGGA

Downstream 100 bases:

>100_bases
GGAGAGTGGGATAGATGATACGGTTTTTAGAGAAATATGTAATGCCGGTAGCAGGGAAGGTTGCAGAGCAGAGGCACTTG
CAAGCAATTCGAGATGGAAT

Product: PTS system cellobiose-specific transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MNILLCCAAGMSSSLIVTKMEKAAEARGIEVKIWAVSGSEVNSHIDEADVLLLGPQVRYLLPKMKELCKGKGVPVDVIQS
VHYGLCNGEAILQAALSMKP

Sequences:

>Translated_100_residues
MNILLCCAAGMSSSLIVTKMEKAAEARGIEVKIWAVSGSEVNSHIDEADVLLLGPQVRYLLPKMKELCKGKGVPVDVIQS
VHYGLCNGEAILQAALSMKP
>Mature_100_residues
MNILLCCAAGMSSSLIVTKMEKAAEARGIEVKIWAVSGSEVNSHIDEADVLLLGPQVRYLLPKMKELCKGKGVPVDVIQS
VHYGLCNGEAILQAALSMKP

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=91, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10682; Mature: 10682

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLCCAAGMSSSLIVTKMEKAAEARGIEVKIWAVSGSEVNSHIDEADVLLLGPQVRYL
CCEEEEECCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHH
LPKMKELCKGKGVPVDVIQSVHYGLCNGEAILQAALSMKP
HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MNILLCCAAGMSSSLIVTKMEKAAEARGIEVKIWAVSGSEVNSHIDEADVLLLGPQVRYL
CCEEEEECCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHH
LPKMKELCKGKGVPVDVIQSVHYGLCNGEAILQAALSMKP
HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]