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The map label for this gene is ydfS [H]

Identifier: 49187985

GI number: 49187985

Start: 4871878

End: 4872747

Strand: Direct

Name: ydfS [H]

Synonym: BAS4999

Alternate gene names: 49187985

Gene position: 4871878-4872747 (Clockwise)

Preceding gene: 49187984

Following gene: 49187986

Centisome position: 93.18

GC content: 35.52

Gene sequence:

>870_bases
ATGTCTCACCTGCCGGAATGGACACTGGTCATTCTTCGCTCTGTATTCATATTAATCATTTTATTCACTATTACAAAATG
CTTAGGAAAAAGGCAAATCTCCCAACTTTCCTTTTTTGAATACATAGCAGGAATGACAATCGGTGATATCGCCGCTCAAA
TAGCTACAGGGCTTGATCAAAAGTTTTTCCATGGTGTCTTTGCCATACTTATTTTCGCCTCAGTACCCTTCTTTGTCGGA
ATTCTCTCCCTAAAAAACAAAACTGCTAGAGATTTTTTTGAAGGGAAGTCTACAGTGTTAATAAAAGATGGCAAAGTACT
TGAGGATAATTTAAAACAAGAAAAATATACAAGTGATGAGTTACTTGAACTTCTTAGAGGAAATGGTGCATTCAGTATAG
CTGAAGTCGAATTTGCTGTCTTAGAACCGAGCGGAGAATTAAATGTATTATTAAAGAAAGATTTTCAGCCACTTACTGCA
AAAGATCTCGGTTTAAAAGTGCCGAATGAAAAAGAACCACAAACTGTTATTATGGATGGGAATGTACTAGATGAACCACT
TTCCGCAAGCGGTCATAACCGAGCTTGGCTACATTCTGAACTAGAAAAACTCGGTGTTGTCATTGAAAACGTCTTTCTCG
GTCAAGTGGATTCATATGGACAACTTACTATCGACATTTATAATGACAAACTACAAATGCCTTCTCCTCAAAACAAACCT
TTATTATTGGCATCTTTAAAAAAATGTCATGCTGATCTTGAACTATTTTCCTTAGAAACAAAGTCGAAATCAGCAAGCGA
AATGTATAGTAAAAACGCGAAACAAATCGAAAAGATTTTAAATAAAGTGACCTATCTTTTAAAAGAATAG

Upstream 100 bases:

>100_bases
AAATGGATAGCATCATCGTTGATTTACAAAATAGAGTTTCCGTATTAGAACGTGAAGAACCTCAATATAAAGGGTTTTAA
GTAGACTGGAGGAAATGACT

Downstream 100 bases:

>100_bases
ATATCGAAAGAACGCTTCAATAAAAAGGCGTTCTTTTCTTTTTTCCTATCGCTTTTCTAACGTTTAAATTTATGTAATTC
GGTTATGATGTTGAAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSHLPEWTLVILRSVFILIILFTITKCLGKRQISQLSFFEYIAGMTIGDIAAQIATGLDQKFFHGVFAILIFASVPFFVG
ILSLKNKTARDFFEGKSTVLIKDGKVLEDNLKQEKYTSDELLELLRGNGAFSIAEVEFAVLEPSGELNVLLKKDFQPLTA
KDLGLKVPNEKEPQTVIMDGNVLDEPLSASGHNRAWLHSELEKLGVVIENVFLGQVDSYGQLTIDIYNDKLQMPSPQNKP
LLLASLKKCHADLELFSLETKSKSASEMYSKNAKQIEKILNKVTYLLKE

Sequences:

>Translated_289_residues
MSHLPEWTLVILRSVFILIILFTITKCLGKRQISQLSFFEYIAGMTIGDIAAQIATGLDQKFFHGVFAILIFASVPFFVG
ILSLKNKTARDFFEGKSTVLIKDGKVLEDNLKQEKYTSDELLELLRGNGAFSIAEVEFAVLEPSGELNVLLKKDFQPLTA
KDLGLKVPNEKEPQTVIMDGNVLDEPLSASGHNRAWLHSELEKLGVVIENVFLGQVDSYGQLTIDIYNDKLQMPSPQNKP
LLLASLKKCHADLELFSLETKSKSASEMYSKNAKQIEKILNKVTYLLKE
>Mature_288_residues
SHLPEWTLVILRSVFILIILFTITKCLGKRQISQLSFFEYIAGMTIGDIAAQIATGLDQKFFHGVFAILIFASVPFFVGI
LSLKNKTARDFFEGKSTVLIKDGKVLEDNLKQEKYTSDELLELLRGNGAFSIAEVEFAVLEPSGELNVLLKKDFQPLTAK
DLGLKVPNEKEPQTVIMDGNVLDEPLSASGHNRAWLHSELEKLGVVIENVFLGQVDSYGQLTIDIYNDKLQMPSPQNKPL
LLASLKKCHADLELFSLETKSKSASEMYSKNAKQIEKILNKVTYLLKE

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=145, Percent_Identity=28.2758620689655, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 32339; Mature: 32208

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLPEWTLVILRSVFILIILFTITKCLGKRQISQLSFFEYIAGMTIGDIAAQIATGLDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
KFFHGVFAILIFASVPFFVGILSLKNKTARDFFEGKSTVLIKDGKVLEDNLKQEKYTSDE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHH
LLELLRGNGAFSIAEVEFAVLEPSGELNVLLKKDFQPLTAKDLGLKVPNEKEPQTVIMDG
HHHHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCEEEECC
NVLDEPLSASGHNRAWLHSELEKLGVVIENVFLGQVDSYGQLTIDIYNDKLQMPSPQNKP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCCCC
LLLASLKKCHADLELFSLETKSKSASEMYSKNAKQIEKILNKVTYLLKE
HHHHHHHHHHCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHLPEWTLVILRSVFILIILFTITKCLGKRQISQLSFFEYIAGMTIGDIAAQIATGLDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
KFFHGVFAILIFASVPFFVGILSLKNKTARDFFEGKSTVLIKDGKVLEDNLKQEKYTSDE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHH
LLELLRGNGAFSIAEVEFAVLEPSGELNVLLKKDFQPLTAKDLGLKVPNEKEPQTVIMDG
HHHHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCEEEECC
NVLDEPLSASGHNRAWLHSELEKLGVVIENVFLGQVDSYGQLTIDIYNDKLQMPSPQNKP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCCCC
LLLASLKKCHADLELFSLETKSKSASEMYSKNAKQIEKILNKVTYLLKE
HHHHHHHHHHCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]