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The map label for this gene is 49187897

Identifier: 49187897

GI number: 49187897

Start: 4791685

End: 4792095

Strand: Reverse

Name: 49187897

Synonym: BAS4909

Alternate gene names: NA

Gene position: 4792095-4791685 (Counterclockwise)

Preceding gene: 49187898

Following gene: 49187896

Centisome position: 91.65

GC content: 33.58

Gene sequence:

>411_bases
ATGAAAACCGAAGATAGACTAGGTTTACTATTATGGTTTCGTTTATCACGTTTTTATAATAAAAGTATTCGTGAGACAAA
TCAGCATTTGAAGAAATGGAATGTATCTGCCGCGCAGTTTGATGTACTAGCTCAAGTTGGAGGGCATGATCGTTTAACGC
AGCAAGAGCTTGGAAATAAGCTATTTGTTACGAAAGGAAATATTACGCAGCTTTTAAATAAAATGGAACAGCTTGATTGG
ATTCGTCGTGAACAAGAAGGTACTACGAAATATATTTCGTTAACAGAAAAGGGAAGAGCTTTATATGAAGAAATCATTCT
GCCTCAAGAAAGATTCCAAGCGGAACAGTTTCAAAATTTAAATGTAGAAGAACAACATCAATTATTACAATTACTAAAAA
AATTACAGTGA

Upstream 100 bases:

>100_bases
AAATGGCGCTGTGCTTTCTTTAGTTCTTACTAAAAATAAGTAATTGACTTTTATAAAGTTTAGTTCTAAACTAATGATAT
AAAACGAGCGAGGTGATGGA

Downstream 100 bases:

>100_bases
GAAAAATTTTTGGGATAAATCTTGAATTCGAGATAATATGAGGTGAAGGATATGTTTAGAAAAGTTGATCATAAAAATAT
GGGAAGAGCAAATCACGGTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKTEDRLGLLLWFRLSRFYNKSIRETNQHLKKWNVSAAQFDVLAQVGGHDRLTQQELGNKLFVTKGNITQLLNKMEQLDW
IRREQEGTTKYISLTEKGRALYEEIILPQERFQAEQFQNLNVEEQHQLLQLLKKLQ

Sequences:

>Translated_136_residues
MKTEDRLGLLLWFRLSRFYNKSIRETNQHLKKWNVSAAQFDVLAQVGGHDRLTQQELGNKLFVTKGNITQLLNKMEQLDW
IRREQEGTTKYISLTEKGRALYEEIILPQERFQAEQFQNLNVEEQHQLLQLLKKLQ
>Mature_136_residues
MKTEDRLGLLLWFRLSRFYNKSIRETNQHLKKWNVSAAQFDVLAQVGGHDRLTQQELGNKLFVTKGNITQLLNKMEQLDW
IRREQEGTTKYISLTEKGRALYEEIILPQERFQAEQFQNLNVEEQHQLLQLLKKLQ

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16214; Mature: 16214

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEDRLGLLLWFRLSRFYNKSIRETNQHLKKWNVSAAQFDVLAQVGGHDRLTQQELGNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCE
LFVTKGNITQLLNKMEQLDWIRREQEGTTKYISLTEKGRALYEEIILPQERFQAEQFQNL
EEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHCCHHHHHHHHHHCC
NVEEQHQLLQLLKKLQ
CHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTEDRLGLLLWFRLSRFYNKSIRETNQHLKKWNVSAAQFDVLAQVGGHDRLTQQELGNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCE
LFVTKGNITQLLNKMEQLDWIRREQEGTTKYISLTEKGRALYEEIILPQERFQAEQFQNL
EEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHCCHHHHHHHHHHCC
NVEEQHQLLQLLKKLQ
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA