Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ybbM [H]
Identifier: 49187801
GI number: 49187801
Start: 4703601
End: 4704398
Strand: Direct
Name: ybbM [H]
Synonym: BAS4811
Alternate gene names: 49187801
Gene position: 4703601-4704398 (Clockwise)
Preceding gene: 49187800
Following gene: 49187805
Centisome position: 89.96
GC content: 39.1
Gene sequence:
>798_bases TTGAAGGGCGTTATTGAACTCCAAATTTGGCAACTTGCCGCTGCATATATTTTCATTCTTATTTTAATTGGGCTTGTGAA GTTAAAAGGAATACCTCGCGAAAAACAAATCGCGCTCGCAACATTCCGTATGACGATTCAGCTCGTACTCGTTGCCTATG TCCTTACATACGTATTTGAAAACAGTAACCCTTTTTATACAATTGCTCTCATTACTTCTATTACTACCTTTGCAATTTTT AATATTTATAAACGAGTTAACATCCCTATGTCCAAAGAATTAAAACAAGTAGCCGCTCTTTCTATGGTAGCCGGATCCAT TGGGCCACTTCTACTATTTATCTTTGTTATTATCGGACATGACCCTTGGTATGCACCGCAATATATCGTTCCGATTACCG GAATGTTAGTTGGAAATGCTATGACTGGTGTTTCTCTCGGTGCAAATACGTTCTTAAACAATATGAAATCACAAAGAGGT CAAATTGAAGGAGCACTTATGCTCGGCGCAACGCCGAAAGAAGCAACTGCTCCGCTCATACGCGACGCTTTTGACTCTGC CATTTTACCAACGATCAATTCTATGGTCGGAATGGGAATTATAAGCTTACCAGGCATGATGACAGGACAAATCTTATCTG GTGTATCACCATTTACAGCCATTCAATATCAAATCGCAATTATACTTGGTATTTCAGGAAGTACCGCTTTTGCGGTTATT ATCTTTTTACAGCTTGGCTATAAAACATTCTTTAATAAGCGTTGTCAGTTGAAAGAAGTAGACTATGGCGGGCGTTAA
Upstream 100 bases:
>100_bases ATCTTCATCACACACTCACAACAACTTCCAGAAGAAATTGCGGACGATATTATTGAGATTAGTAAAGCAAACGGTGCAAC TAGAAAGGAAGTGCTCTCAG
Downstream 100 bases:
>100_bases ATTGTGCACTGTTCATGGTAGATGAAATTATATCGACGATTTTTCGAATATATCTATCATAACTCAAAATATATCAACGA TTTTTGAAATATATCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF NIYKRVNIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI IFLQLGYKTFFNKRCQLKEVDYGGR
Sequences:
>Translated_265_residues MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF NIYKRVNIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI IFLQLGYKTFFNKRCQLKEVDYGGR >Mature_265_residues MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF NIYKRVNIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI IFLQLGYKTFFNKRCQLKEVDYGGR
Specific function: Unknown
COG id: COG0390
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0014 family [H]
Homologues:
Organism=Escherichia coli, GI87081746, Length=246, Percent_Identity=34.9593495934959, Blast_Score=148, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005226 [H]
Pfam domain/function: PF03649 UPF0014 [H]
EC number: NA
Molecular weight: Translated: 28896; Mature: 28896
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFE CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NSNPFYTIALITSITTFAIFNIYKRVNIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGH CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLI CCCCCCEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH RDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHEEEEEEEEEECCCHHHHHH IFLQLGYKTFFNKRCQLKEVDYGGR HHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFE CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NSNPFYTIALITSITTFAIFNIYKRVNIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGH CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLI CCCCCCEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH RDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHEEEEEEEEEECCCHHHHHH IFLQLGYKTFFNKRCQLKEVDYGGR HHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]