Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yobU [H]
Identifier: 49187789
GI number: 49187789
Start: 4694528
End: 4695007
Strand: Direct
Name: yobU [H]
Synonym: BAS4799
Alternate gene names: 49187789
Gene position: 4694528-4695007 (Clockwise)
Preceding gene: 49187787
Following gene: 49187790
Centisome position: 89.78
GC content: 37.92
Gene sequence:
>480_bases ATGATAAACGAACCTATCATCGTAAAAAAAGAAGCTTTCCAAGCAATCGGCATTTCGATTACGACAACAAATGAAAAAGA GGCATCTACAGAAGGAAAAATTCCCGGGCTTTGGAACCGGTACTTCCAAGAACAAATCATGCACCACATTCCAAATCAAC AAACGAAAGAAACATTCGCTTTTTACTCAAACTATGAATCAGATGAAACGGGTACATATACCTTTACGATTGGCATGCCC GTTTCTTCATTAGAAGACGTTCCTGAAACTATGACAACTTTAATAATACCTGCCGCTACGTATGCGGTATTTACAACGAG AAAGGGACCAGTTGCTGAAGTCGTTTGCGAGGCTTGGGAATATATTTGGAAATGGTCAAAAGAAAATAAACGTGCTTTCA CAATAGACTTTGAGCTTTATGATGAAAGAGCGTTAGATCCAACTAACGTACAATTGGATATTTATATTGCATTAGCCTAA
Upstream 100 bases:
>100_bases ATTTATCATTAAAATTTTCGAAAAATAGTAACCGTTATATGTAAAAATATGTTACATTATAACAAGAACAAACGTTCTTA TTATAAAGGAGGAATTTTTC
Downstream 100 bases:
>100_bases ACGACAAAAAAGAAGATACCATTTGGTATCTTCTTTTTTGTCGTTAAATAGCCACTGTGCAAATTCAACATAATTGTCTA CAATGAGAAAGTGCAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MINEPIIVKKEAFQAIGISITTTNEKEASTEGKIPGLWNRYFQEQIMHHIPNQQTKETFAFYSNYESDETGTYTFTIGMP VSSLEDVPETMTTLIIPAATYAVFTTRKGPVAEVVCEAWEYIWKWSKENKRAFTIDFELYDERALDPTNVQLDIYIALA
Sequences:
>Translated_159_residues MINEPIIVKKEAFQAIGISITTTNEKEASTEGKIPGLWNRYFQEQIMHHIPNQQTKETFAFYSNYESDETGTYTFTIGMP VSSLEDVPETMTTLIIPAATYAVFTTRKGPVAEVVCEAWEYIWKWSKENKRAFTIDFELYDERALDPTNVQLDIYIALA >Mature_159_residues MINEPIIVKKEAFQAIGISITTTNEKEASTEGKIPGLWNRYFQEQIMHHIPNQQTKETFAFYSNYESDETGTYTFTIGMP VSSLEDVPETMTTLIIPAATYAVFTTRKGPVAEVVCEAWEYIWKWSKENKRAFTIDFELYDERALDPTNVQLDIYIALA
Specific function: Unknown
COG id: COG3708
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010499 - InterPro: IPR011256 [H]
Pfam domain/function: PF06445 AraC_E_bind [H]
EC number: NA
Molecular weight: Translated: 18248; Mature: 18248
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEPIIVKKEAFQAIGISITTTNEKEASTEGKIPGLWNRYFQEQIMHHIPNQQTKETFA CCCCCEEEEHHHHHEECEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH FYSNYESDETGTYTFTIGMPVSSLEDVPETMTTLIIPAATYAVFTTRKGPVAEVVCEAWE HHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH YIWKWSKENKRAFTIDFELYDERALDPTNVQLDIYIALA HHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MINEPIIVKKEAFQAIGISITTTNEKEASTEGKIPGLWNRYFQEQIMHHIPNQQTKETFA CCCCCEEEEHHHHHEECEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH FYSNYESDETGTYTFTIGMPVSSLEDVPETMTTLIIPAATYAVFTTRKGPVAEVVCEAWE HHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH YIWKWSKENKRAFTIDFELYDERALDPTNVQLDIYIALA HHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]