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The map label for this gene is bioYB [H]

Identifier: 49187777

GI number: 49187777

Start: 4676705

End: 4677298

Strand: Direct

Name: bioYB [H]

Synonym: BAS4787

Alternate gene names: 49187777

Gene position: 4676705-4677298 (Clockwise)

Preceding gene: 49187776

Following gene: 49187778

Centisome position: 89.44

GC content: 39.56

Gene sequence:

>594_bases
ATGAGAAGATTTCATGTTTTAGATTTAGCATTAGCCGCCATGTTCGTCGCTCTTATGGCCATTGGTGCAAATATTGTATC
TTGGGCACCATTCCTGCAAGTAGCGGGCATCCCATTATCTATGCAACCATTTTTCGCAATTTTAGCAGGGCTTCTTCTTG
GAAGTAGACTTGGTGCATTATCAATGACTGTTTACATGCTCGTTGGAGTAGCAGGTGCACCAATCTTCGCTAACTTCAAA
GCTGGATTTGGAGCACTTTTAGATCCTACTGGTGGCTTTATTATTGCATTTATTATCGTTGCTTACGTATCAGGAAAACT
AGTAGAACAAAAGGAAAAACCGACATTCAGTACATTTGCAATTGCTTCGTTCACAGGAATCATTTTAACGTATATTATCG
GTACTACTTATATGTACGGGGCAGTCAACCTCTTCATGGGTGGCAATATGAGTTATAAAGCTGCATGGATGATTATGATG
TGGTTTGCAGTAAAAGATATTGTGTTTACAATAATCGGTGCTATTATCGCACCTCGCATATACTATGCTGTACGTCGTTC
TGCTTATCAGCATTCTCATTCGACGATTTCATAA

Upstream 100 bases:

>100_bases
GAGAGTATTTGAAGCCTTCTTATCAAAATATTTTAATTGACAACAAGTAAATAGTTTCGCTACGATAATGTTAACCTAAA
AACAACAGGAGGTTAACATT

Downstream 100 bases:

>100_bases
TAAAAAGGAGTTATCTTACTATGTTAAGATAACTCTTTTTTCATTTTCGACAATATACGACACATATTAGAAATGATTTT
TGTTATGCTAATTCAGCAAA

Product: bioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKEKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGNMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS

Sequences:

>Translated_197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKEKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGNMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS
>Mature_197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKEKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGNMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS

Specific function: Putative biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 21332; Mature: 21332

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SMTVYMLVGVAGAPIFANFKAGFGALLDPTGGFIIAFIIVAYVSGKLVEQKEKPTFSTFA
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
IASFTGIILTYIIGTTYMYGAVNLFMGGNMSYKAAWMIMMWFAVKDIVFTIIGAIIAPRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAVRRSAYQHSHSTIS
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SMTVYMLVGVAGAPIFANFKAGFGALLDPTGGFIIAFIIVAYVSGKLVEQKEKPTFSTFA
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
IASFTGIILTYIIGTTYMYGAVNLFMGGNMSYKAAWMIMMWFAVKDIVFTIIGAIIAPRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAVRRSAYQHSHSTIS
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]