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The map label for this gene is yxdM [H]

Identifier: 49187718

GI number: 49187718

Start: 4610365

End: 4610604

Strand: Direct

Name: yxdM [H]

Synonym: BAS4727

Alternate gene names: 49187718

Gene position: 4610365-4610604 (Clockwise)

Preceding gene: 49187717

Following gene: 49187719

Centisome position: 88.17

GC content: 30.83

Gene sequence:

>240_bases
ATGACCTTTTGGCAATTTGCATTTAAAAACGTCACGCGCAACTCGAGAGCTTATTTTGCTTACTTTGTAAGTAGTTCTTT
TTCGATTGCCGTTTTCTTTTCATTTGCTGTTTACTTATTCCATCCGAAATTACAAAATTTTGGCATTGTCTCTGAAATTT
CAGGATTAATGATATTTTCGGAAGTAGTAATTGTATTTTTTCTTTCTTCTTTTTACTATATTCCATTGGGACTTTTTTAA

Upstream 100 bases:

>100_bases
GCATGATCGTAACATATGCAAGCAAAATGTATGAGAACTCACTCTCATACATTTTTTGCAATAAAACTACTTCTATATCT
TCTAACCGGAGGTATAATTT

Downstream 100 bases:

>100_bases
AAGTTAGAAAAAAAACAATTTGGCGTTTTGACCGTTTTGGGAATATCTAGAAAACAATTACATCGTCTCGTTTTTATGGA
GAATATGTTAATCGGTATTT

Product: ABC transporter permease, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQNFGIVSEISGLMIFSEVVIVFFLSSFYYIPLGLF

Sequences:

>Translated_79_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQNFGIVSEISGLMIFSEVVIVFFLSSFYYIPLGLF
>Mature_78_residues
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQNFGIVSEISGLMIFSEVVIVFFLSSFYYIPLGLF

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 9232; Mature: 9101

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQNFGIVSEISGLMIFS
CCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EVVIVFFLSSFYYIPLGLF
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQNFGIVSEISGLMIFS
CHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EVVIVFFLSSFYYIPLGLF
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]