Click here to switch to the map view.

The map label for this gene is pld1 [H]

Identifier: 49187708

GI number: 49187708

Start: 4600709

End: 4601719

Strand: Reverse

Name: pld1 [H]

Synonym: BAS4717

Alternate gene names: 49187708

Gene position: 4601719-4600709 (Counterclockwise)

Preceding gene: 49187709

Following gene: 49187707

Centisome position: 88.01

GC content: 38.77

Gene sequence:

>1011_bases
ATGAAAGATTTATTAAAAGGTACACTTGGTTTTGGTACGGCACCACTAGGTAATATGTACCGTAATATTCCAGAAGAAGA
AGCAATCGCAACAGTGGATGCTGCTTGGGATAATGGTGTGCGTTACTTTGATACAGCTCCACTTTATGGATCTGGTTTAG
CAGAGATTCGTCTTGGTGAAGCATTATCGAAAAGAAATCGTGATGAGTACTTCTTAAGTACAAAAGTAGGTCGAATTATT
TCAGATGAATTGGAAGATCCATCTACACGTGATTTAGGTGAAAAAGGCGGACTTTTCGAATTTGGTCGTAAAAATAAAAT
TATCAATGACTACAGTGCGGACGCAACTCTCCGTTCTATTGAAGATAGTTTAAAATGTTTAAAAACAGATCGTCTAGATT
TTGTTTATATTCATGACGTAGCACAAGATTTTTATGGAGATGAGTGGATTTCACAATTTGAGATTGCTCGAACAGGAGCA
TTCCGTGCACTTACTCAATTGCGTGATGAAGGTGTAATTAAAGGCTGGGGCCTTGGAGTAAATAAAGTAGAGGCTATTGA
ACTTATGCTGGACTTAGAAGAAGCAAAACCAAATGTTTCTTTACTAGCTGGTCGCTATTCATTATTAGACCACGAGCGTG
CGTTAGAACGCGTAATGCCTGCGGCTGTAAAAAACAATATGGACATTGTTGTTGGTGGACCATATAGCTCAGGTGTTCTT
GCTGGAGGTACTCACTTCGAATACCAAAAAGCATCACCAGAAATTATTGCAAAAGTTAATAAAATGAAAAACCTTGCAGA
TCGTCATGGAATCAGTATTAAAGCTGCTGCTTTACAATTTGCATTGGCTAATCCAGCAGTTGCAGCTGTTATTCCTGGTG
CAAGTAAACCGGAACGAATTGCAGAAGACCAAGCTGCATTGAAAACAGTGATTCCAGCAGCATTCTGGGAAGAAATGCGT
GAACAAAAATTAGTTGCAGTTAATGCGCCACTACCAATTAACGTTAAATAA

Upstream 100 bases:

>100_bases
TGCGTACTGCTTTGACTGCTCGAATTCTTTAGGGCAGTTCTTTTCACATTAATTGATATCCATTCATCATTTTTAAATAC
ATTTTAGGAGGAGATTTTAA

Downstream 100 bases:

>100_bases
AAAGGAGAGTAATGAAAATGGCAAATACTATTACATCTATTGAAATTCCAGCTTCACCTAAGCAAGTATGGCAATTAATT
GGAGGTTTTGATGCACTTCC

Product: aldo/keto reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKDLLKGTLGFGTAPLGNMYRNIPEEEAIATVDAAWDNGVRYFDTAPLYGSGLAEIRLGEALSKRNRDEYFLSTKVGRII
SDELEDPSTRDLGEKGGLFEFGRKNKIINDYSADATLRSIEDSLKCLKTDRLDFVYIHDVAQDFYGDEWISQFEIARTGA
FRALTQLRDEGVIKGWGLGVNKVEAIELMLDLEEAKPNVSLLAGRYSLLDHERALERVMPAAVKNNMDIVVGGPYSSGVL
AGGTHFEYQKASPEIIAKVNKMKNLADRHGISIKAAALQFALANPAVAAVIPGASKPERIAEDQAALKTVIPAAFWEEMR
EQKLVAVNAPLPINVK

Sequences:

>Translated_336_residues
MKDLLKGTLGFGTAPLGNMYRNIPEEEAIATVDAAWDNGVRYFDTAPLYGSGLAEIRLGEALSKRNRDEYFLSTKVGRII
SDELEDPSTRDLGEKGGLFEFGRKNKIINDYSADATLRSIEDSLKCLKTDRLDFVYIHDVAQDFYGDEWISQFEIARTGA
FRALTQLRDEGVIKGWGLGVNKVEAIELMLDLEEAKPNVSLLAGRYSLLDHERALERVMPAAVKNNMDIVVGGPYSSGVL
AGGTHFEYQKASPEIIAKVNKMKNLADRHGISIKAAALQFALANPAVAAVIPGASKPERIAEDQAALKTVIPAAFWEEMR
EQKLVAVNAPLPINVK
>Mature_336_residues
MKDLLKGTLGFGTAPLGNMYRNIPEEEAIATVDAAWDNGVRYFDTAPLYGSGLAEIRLGEALSKRNRDEYFLSTKVGRII
SDELEDPSTRDLGEKGGLFEFGRKNKIINDYSADATLRSIEDSLKCLKTDRLDFVYIHDVAQDFYGDEWISQFEIARTGA
FRALTQLRDEGVIKGWGLGVNKVEAIELMLDLEEAKPNVSLLAGRYSLLDHERALERVMPAAVKNNMDIVVGGPYSSGVL
AGGTHFEYQKASPEIIAKVNKMKNLADRHGISIKAAALQFALANPAVAAVIPGASKPERIAEDQAALKTVIPAAFWEEMR
EQKLVAVNAPLPINVK

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase family [H]

Homologues:

Organism=Escherichia coli, GI1788070, Length=332, Percent_Identity=25.6024096385542, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI212645785, Length=301, Percent_Identity=26.578073089701, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646159, Length=286, Percent_Identity=25.1748251748252, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24646155, Length=269, Percent_Identity=26.3940520446097, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: =1.1.1.107 [H]

Molecular weight: Translated: 36914; Mature: 36914

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLLKGTLGFGTAPLGNMYRNIPEEEAIATVDAAWDNGVRYFDTAPLYGSGLAEIRLGE
CCHHHHHHHCCCCCCHHHHHHCCCHHHHHEEEEHHCCCCCEEEECCCCCCCCHHHHHHHH
ALSKRNRDEYFLSTKVGRIISDELEDPSTRDLGEKGGLFEFGRKNKIINDYSADATLRSI
HHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
EDSLKCLKTDRLDFVYIHDVAQDFYGDEWISQFEIARTGAFRALTQLRDEGVIKGWGLGV
HHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
NKVEAIELMLDLEEAKPNVSLLAGRYSLLDHERALERVMPAAVKNNMDIVVGGPYSSGVL
CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
AGGTHFEYQKASPEIIAKVNKMKNLADRHGISIKAAALQFALANPAVAAVIPGASKPERI
ECCCCCEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHH
AEDQAALKTVIPAAFWEEMREQKLVAVNAPLPINVK
HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC
>Mature Secondary Structure
MKDLLKGTLGFGTAPLGNMYRNIPEEEAIATVDAAWDNGVRYFDTAPLYGSGLAEIRLGE
CCHHHHHHHCCCCCCHHHHHHCCCHHHHHEEEEHHCCCCCEEEECCCCCCCCHHHHHHHH
ALSKRNRDEYFLSTKVGRIISDELEDPSTRDLGEKGGLFEFGRKNKIINDYSADATLRSI
HHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
EDSLKCLKTDRLDFVYIHDVAQDFYGDEWISQFEIARTGAFRALTQLRDEGVIKGWGLGV
HHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
NKVEAIELMLDLEEAKPNVSLLAGRYSLLDHERALERVMPAAVKNNMDIVVGGPYSSGVL
CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
AGGTHFEYQKASPEIIAKVNKMKNLADRHGISIKAAALQFALANPAVAAVIPGASKPERI
ECCCCCEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHH
AEDQAALKTVIPAAFWEEMREQKLVAVNAPLPINVK
HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA