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The map label for this gene is ytoP [H]

Identifier: 49187584

GI number: 49187584

Start: 4492721

End: 4493794

Strand: Reverse

Name: ytoP [H]

Synonym: BAS4591

Alternate gene names: 49187584

Gene position: 4493794-4492721 (Counterclockwise)

Preceding gene: 49187586

Following gene: 49187583

Centisome position: 85.95

GC content: 40.69

Gene sequence:

>1074_bases
GTGAATAAAGAGACATTACAATTATTTCGTACGTTAACAGAATTACAAGGTGCATCAGGTTTTGAACATGATGTGCGCCG
TTTTATGAAGCAAGAATTAAGCAAATATGCAGATGAAATTGTACAAGACGGTTTAGGTAGCGTATTTGGTCTGAAAAAAG
GGGACGAAACTGGCCCGCGTGTTCTTGTAGCAGGTCATATGGATGAAGTAGGTTTCATGATTACGCAAATTACGAAAAAC
GGAATGCTTCGTTTTCAACCGTTAGGCGGCTGGTGGAGCCAAGTACTATTAGCGCAACGCGTACAAGTGATGACGAAGAA
TGGTCCTGTTATTGGGGTTGTTGGTTCTATCCCTCCTCATTTATTAAGTGACGCGCAACGTGCAAAACCGATGGATATAA
AAAACATGTTAATTGATATAGGTGCAGATAGCTATGAAGATGCGATTGAAATTGGTGTAAAACCAGGACAACAAATCGTA
CCAATCTGCCCGTTTACGCCGATGGCAAACGAAAAGAAAATTATGGCGAAAGCTTGGGACAACCGTTACGGATGTGGTCT
TGCAATCGAATTACTAAAAGAATTAAAAGACGAAACATTACCAAACACATTATACTCTGGTGCGACTGTACAAGAAGAAG
TTGGTCTTCGCGGTGCACAAACTGCTGCAAATATGATCCAACCAGACATTTTCTATGCGCTTGATGCAAGTCCAGCAAAC
GATGCATCTGGTGACAAAACACAGTTCGGTCAATTAGGAAAAGGTGCTCTTCTTCGTATTTACGATCGTACGATGGTAAC
ACATAGAGGAATGCGTGAATTCATTTTAGATACAGCAGAAACAAACAACATTCCGTACCAATACTTTATTTCACAAGGTG
GTACAGATGCGGGCCGTGTACATACAAGTAACTCAGGTATCCCATCAGCAGTAATTGGTGTTTGCGCACGTTACATTCAT
ACACATGCTTCTATTTTACATGTTGATGATTATGCAGCAGCGAAAGAGCTAATTACGAAGCTTGTAAGAGCAACAGATAA
AACGACGTTAGAGACAATTAAGAATAACGCGTAA

Upstream 100 bases:

>100_bases
ATAAAGCAAATACAGCTAAAAAAGAAGAAACTAGAAACATTTCGAAAATTTCGTTACAATAAAAGAGGTATTCTACTAAG
GTTTGAAAGAAGGGGACTTC

Downstream 100 bases:

>100_bases
GAAGGAAGGGCGAAAAACCCTTCTTTTTTTAGGTTGAATAGATGCTCGAACGATGTATTAAGATCCCGAGTATGAAGAGA
GAGGTAGGCTGTTTTGGTGT

Product: M42 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Sequences:

>Translated_357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
>Mature_357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRVHTSNSGIPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=356, Percent_Identity=38.7640449438202, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=31.9884726224784, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI87082417, Length=355, Percent_Identity=29.2957746478873, Blast_Score=141, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39155; Mature: 39155

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
VLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPH
EEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIVPICPFTPMANEKKIMAKAWD
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCC
NRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
CCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRV
CCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE
HTSNSGIPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
ECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
VLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPH
EEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIVPICPFTPMANEKKIMAKAWD
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCC
NRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
CCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETNNIPYQYFISQGGTDAGRV
CCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE
HTSNSGIPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
ECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]