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The map label for this gene is yjdJ [H]

Identifier: 49187549

GI number: 49187549

Start: 4461103

End: 4461492

Strand: Direct

Name: yjdJ [H]

Synonym: BAS4555

Alternate gene names: 49187549

Gene position: 4461103-4461492 (Clockwise)

Preceding gene: 49187548

Following gene: 49187555

Centisome position: 85.32

GC content: 29.49

Gene sequence:

>390_bases
ATGAACTCGAAAAGGAGATTACAACAAAAAGGTTACAGGCATATAAATACACGATATAATAACCATAAAATAGGAGGTGG
ATTCTTTTTGACAATAAACCAAATGGTTCAACTCGGAAGTTCATTTATGCTATTTATTACTTCCGCACTGATGAGTTGGT
ATCAGGGAAGTAATTTAATAGATAATCCTGATGAATGGAAATATAGCGCTAAATTTACGAATTACTTTAAAGGCACCGTT
TCAAATTACGAAGATATTTATCAAATCGATTTTTTTATATATGCAGCAAAATTTTATCCAACAGCATTTATCGTTATGCT
CATTAGCTTACTTTATATGCTTATATTAATTCTTTATACTCTATTTAAAAGAAAAGATCCGGCGATTTAA

Upstream 100 bases:

>100_bases
TTAGCAAAGAAAAAATAATGAGCGCTTCTAGTGACATTTTGTTTTACCACTCCTTTCTAGTTGTTATACATTTATCATAC
CGCTTACATGTGATTTCCGT

Downstream 100 bases:

>100_bases
ATCCATACATAAAAACCCCGAATCATAAACTTTTCAGCCTACAATTCGGGGTACTATTTGTTTATATTCGTTTCTAATTA
GTAACGAATTAAGAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNSKRRLQQKGYRHINTRYNNHKIGGGFFLTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTV
SNYEDIYQIDFFIYAAKFYPTAFIVMLISLLYMLILILYTLFKRKDPAI

Sequences:

>Translated_129_residues
MNSKRRLQQKGYRHINTRYNNHKIGGGFFLTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTV
SNYEDIYQIDFFIYAAKFYPTAFIVMLISLLYMLILILYTLFKRKDPAI
>Mature_129_residues
MNSKRRLQQKGYRHINTRYNNHKIGGGFFLTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTV
SNYEDIYQIDFFIYAAKFYPTAFIVMLISLLYMLILILYTLFKRKDPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016508 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15278; Mature: 15278

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKRRLQQKGYRHINTRYNNHKIGGGFFLTINQMVQLGSSFMLFITSALMSWYQGSNLI
CCCHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DNPDEWKYSAKFTNYFKGTVSNYEDIYQIDFFIYAAKFYPTAFIVMLISLLYMLILILYT
CCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKRKDPAI
HHHCCCCCC
>Mature Secondary Structure
MNSKRRLQQKGYRHINTRYNNHKIGGGFFLTINQMVQLGSSFMLFITSALMSWYQGSNLI
CCCHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DNPDEWKYSAKFTNYFKGTVSNYEDIYQIDFFIYAAKFYPTAFIVMLISLLYMLILILYT
CCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKRKDPAI
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]