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The map label for this gene is ytcJ [H]

Identifier: 49187535

GI number: 49187535

Start: 4446666

End: 4448234

Strand: Reverse

Name: ytcJ [H]

Synonym: BAS4541

Alternate gene names: 49187535

Gene position: 4448234-4446666 (Counterclockwise)

Preceding gene: 49187536

Following gene: 49187533

Centisome position: 85.07

GC content: 39.32

Gene sequence:

>1569_bases
ATGGGGGAAATTTGGTATGGCGGCAACATTTACACGATGAGGGAAGAAAATGAAAAAGTAGAAGCTATTTATGTTGAAAA
TGGCAGGATCGTTGATAATGGAAGGAAAGAAGAGTTAGAAAACCGATATGCTGTGGCTAAATTGCACGATTTAAAAGGCA
AAACGATGATTCCAGGCCTCGTTGATAGCCATATGCATCTTATTGGTCACGGGGAGAGATTACTTCGTTTAGATTTATCA
AATTGCACATCTTATAGCGAAGTGCTGACTCTCGTTCGGAGGCGAGTAGAAGAAGCGCCGAAAGGTTCTTGGATTATCGG
AGAGGGCTGGAATGAAAATAACTTTAAGGATACGAAAGATGTTCACGCAAAAGATTTAGATGCAATTTCAAGAGAACATC
CCATTTTATTAAAGCGCGTTTGTCGCCATGTTACATGGGTGAACTCATACATACTGCAAGAAGCGAACATAACAGAAAAG
GCAAAAGATCCAAAAGGCGGGAAAGTTGGACGGGACTCATTCAATAAATTAACAGGACTTTTATATGAACAAGGCCAAGA
GTTAATCAAACATGTCCAGCCTGAAATTGATGAATCCTACTTACAAAGAGCTTTGCAAACAGCAATTAAAGACTGCTGGC
AATATGGACTCGTTGGCGGGCATACGGAAGATTTAAATTATTACGGTGGATTTAGAAAAACGCATAATGCGTTTTCTCAT
GTTATAAAAGAAATGCCATTTAAAGCACATTTACTCGTTCACCATGAAGTAGCACATGAACGAAAAGAATATGAAAATGA
GCATTATATTGAGTTTGGGGCAATGAAAATTTTTTCTGACGGTTCTTTTGGCGGAAGAACAGCTTTATTAAGTGAACCGT
ATGAAGATGCGAAGGAAACGAATGGGGTTGCGATTTTCTCACGTGAAGAACTTGCGGAGTTAGTGAAAAAAGCACGAGAC
TTACATATGCCAGTTGCGATTCATACTATCGGTGACTTATCGCTTGAATATGTCATTGATGTACTTGAATTGTATCCGCC
AGCAGAAGGATTACGTGACCGCATTATTCATTGTCAGCTAGCTCGTGAAGAGTTGATTGAAAGAATGAAAAACTTACAAG
CCATTATTGATATACAACCAGTCTTTGTTTCATCGGATTTTCCATCAGTCATTGAAAAACTGGGCGAGCAACGTCTTCGT
TATGCCTACGCTTGGAAGACGTTACTGGAGGCAGGATTACACTGTAACGGGGGATCAGATGCTCCGATTGAGCAAGTGAA
TCCGTTTCTAGGCATATATAGCGCTGTTACACGTAGAAGTTTTATTGACGGTTTATGTTATATGCCAGAAGAAAGATTAA
CGGTATATGAGGCTGTTTCTTTATTTACAACAGGAAGTGCCTATGCAATTGGAAAAGAAGCGAAGCGAGGGCAAATTACA
AAAGGATATGAGGCAGACTTTACAATATTAGACCGCGATATTTTTGAAATAGAGGCAGAAGAAATAAAAGAAGTACAGGC
AGAAATGACCGTAATAGATGGCCAAGTCGTCTATAGAAAAGATTCATAA

Upstream 100 bases:

>100_bases
AGTTACAACGTCTACTACTGAACAAAAGTAATGTTTAGAAAAGCACCATGTTTTGAAATGGTGCTTTTTTTTATACAATA
AAACAAAGGAGATGAAATAT

Downstream 100 bases:

>100_bases
AAATATATGAGCGATTATCGGAATATATCGACTTACCGATAAAAATTGACAAGAATATTGGCCGGATAGCGAGAGGTTGT
TGTTCGCGCCAATCGGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AKDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLEYVIDVLELYPPAEGLRDRIIHCQLAREELIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS

Sequences:

>Translated_522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AKDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLEYVIDVLELYPPAEGLRDRIIHCQLAREELIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
>Mature_521_residues
GEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLSN
CTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKA
KDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSHV
IKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARDL
HMPVAIHTIGDLSLEYVIDVLELYPPAEGLRDRIIHCQLAREELIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRY
AYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQITK
GYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59580; Mature: 59449

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAKDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKET
HHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLEYVIDVLELYPPAEGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AREELIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC
>Mature Secondary Structure 
GEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAKDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKET
HHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLEYVIDVLELYPPAEGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AREELIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]