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The map label for this gene is ypjC [H]

Identifier: 49187525

GI number: 49187525

Start: 4438315

End: 4438977

Strand: Direct

Name: ypjC [H]

Synonym: BAS4531

Alternate gene names: 49187525

Gene position: 4438315-4438977 (Clockwise)

Preceding gene: 49187523

Following gene: 49187527

Centisome position: 84.88

GC content: 32.43

Gene sequence:

>663_bases
ATGAGGAACATCCAAAGTCGACAAATTATTAAAGAAATTTTTATGGTTTTAATCGGTTCATTTATTTTAGCAGCAGCGCT
ATATCACATTCACTTCCAAAACCACTTAACAGAAGGTGGCTTTGTAGGTATTGCACTATTCATCCAAAATTTTTATGATA
TTTCACCATCTATTTCAACTGTAATTATGGATATCCCAATTATTTTACTGTGTGCTTCATTTTTAGGTAGAAAAATGGTT
GGCTATTCATTCTTAGGTTCAATTTCATTCGGAGTATTTTATTCTCTTATGGAAAATTATTCTCCATTTACGATTGATTT
ATCAAACAATTTATTTATAGCTGCAGTAGTTGGCGGTGCGTTAGCTGGTATTGGACTCGGTTTTATATTGCGATTTGGCG
GTGCAACCGGCGGAGACGATATTTTAACAATTGTATTAAGTAAAAAAACACGTTTTACAATTGGGCAAATTTTCTTCGTC
TTTGACGCGATTGTTCTTGCGCTTTCATTATATTATTTAAATTGGACAGAAATTGCTTTTACTATTCTTTCGATTGCCGT
ACAGGCAAAAACATTGGATTTAATTTATTATCCAAAAACAGAAAAAGCAGAAGAAAAGCAACCAGTATCTATTCCAATGT
CCAAAAAGCATGCAACAAATTAA

Upstream 100 bases:

>100_bases
CGTAGTTAGTTTTTTCGTAAACTAACTGAAAGCTACATGTGAGCTCGTAGTTAGTTTACAACACAAAAAGGACTACTAAC
TACGGAAAGAAGGAATAACG

Downstream 100 bases:

>100_bases
AAAAGCGAAAGGCCTCGGCCTCTCGCTTTTTTTATGCTCTTTTTTCCTTCTCAACTATGTGGCGTACTTGATAAAATCTA
TTTGCAAATTCAGTAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRNIQSRQIIKEIFMVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSISTVIMDIPIILLCASFLGRKMV
GYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGALAGIGLGFILRFGGATGGDDILTIVLSKKTRFTIGQIFFV
FDAIVLALSLYYLNWTEIAFTILSIAVQAKTLDLIYYPKTEKAEEKQPVSIPMSKKHATN

Sequences:

>Translated_220_residues
MRNIQSRQIIKEIFMVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSISTVIMDIPIILLCASFLGRKMV
GYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGALAGIGLGFILRFGGATGGDDILTIVLSKKTRFTIGQIFFV
FDAIVLALSLYYLNWTEIAFTILSIAVQAKTLDLIYYPKTEKAEEKQPVSIPMSKKHATN
>Mature_220_residues
MRNIQSRQIIKEIFMVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSISTVIMDIPIILLCASFLGRKMV
GYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGALAGIGLGFILRFGGATGGDDILTIVLSKKTRFTIGQIFFV
FDAIVLALSLYYLNWTEIAFTILSIAVQAKTLDLIYYPKTEKAEEKQPVSIPMSKKHATN

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 24302; Mature: 24302

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIQSRQIIKEIFMVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSIST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
VIMDIPIILLCASFLGRKMVGYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHH
LAGIGLGFILRFGGATGGDDILTIVLSKKTRFTIGQIFFVFDAIVLALSLYYLNWTEIAF
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSIAVQAKTLDLIYYPKTEKAEEKQPVSIPMSKKHATN
HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNIQSRQIIKEIFMVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSIST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
VIMDIPIILLCASFLGRKMVGYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHH
LAGIGLGFILRFGGATGGDDILTIVLSKKTRFTIGQIFFVFDAIVLALSLYYLNWTEIAF
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSIAVQAKTLDLIYYPKTEKAEEKQPVSIPMSKKHATN
HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]