Click here to switch to the map view.

The map label for this gene is ycbO [H]

Identifier: 49187425

GI number: 49187425

Start: 4339712

End: 4340416

Strand: Reverse

Name: ycbO [H]

Synonym: BAS4430

Alternate gene names: 49187425

Gene position: 4340416-4339712 (Counterclockwise)

Preceding gene: 49187426

Following gene: 49187424

Centisome position: 83.01

GC content: 34.47

Gene sequence:

>705_bases
ATGCTTAGATTAATGAAGCTCGAGTGGAAAAAGCATCAATTATCTAGTTGCTTTAAAAGTGTAGCAATTTGTATTATAGC
AATTTTCGCTGTAGTAAGCCTTATGGCATTGGGAATGAAAGCTGAGGGAGACGTGCTCTTCTCTGACTTCAAACAGAACA
TGGATTTAGCAAATATTTTTATTAGAATAACATTCATTATTTTTAGTTCGGTCATTTTATCACGTTTAGTAATTGATGAG
TATAAGAACAAAACGATACAACTAGCATTTATGTATCCGCTACAAAGGAAAATGCTAATGAGTGCGAAATTAACAATTGT
TTTCTGTTTTTGTTTTGTGAGCACGATTATCGCTACTTTCATTATTAGCTTGCTCGTATATTTTGTGAGTCCAATGATGG
GACTGATTGAAACACCTGCTACGATAGGCGAAATAATAGCTACCGTTCCAGGTACTATTATAAGTGCATTTATGATATCT
GGTATAAGTTTAATTCCTTTATTTTTTGGAATGAGAAAGAAATCGACACCGACAACGATTACTTCGGCAGTAATAATTGG
TATGCTGATTAGTGGTAACGTTGGTGCTGGAAACGATCAAGTAAGTATGTTTGATTTTATAGCTATCCCAATCGTGCTCT
GTTTATTAGGAATTTTCATTAGCTATCTATCGTTCCGTAAAATTGACAAGATCGATGTGGCGTGA

Upstream 100 bases:

>100_bases
TTAATTCTACTAATGATAGGAATGTTAAGCGTAGTTACTGCTGGAATTAGAATGTTAGCAGTGTAGAGACAGTTATATAA
AGAATGGAGGCGTGGTTTGT

Downstream 100 bases:

>100_bases
AGTAAGCTTAAAACAAAAACGAACTGGGGTATGAATAATGAAAAAAATGATAGTAATTGCAATATTATTCATTACAATTG
CTAGTGTAGTTTTTGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLRLMKLEWKKHQLSSCFKSVAICIIAIFAVVSLMALGMKAEGDVLFSDFKQNMDLANIFIRITFIIFSSVILSRLVIDE
YKNKTIQLAFMYPLQRKMLMSAKLTIVFCFCFVSTIIATFIISLLVYFVSPMMGLIETPATIGEIIATVPGTIISAFMIS
GISLIPLFFGMRKKSTPTTITSAVIIGMLISGNVGAGNDQVSMFDFIAIPIVLCLLGIFISYLSFRKIDKIDVA

Sequences:

>Translated_234_residues
MLRLMKLEWKKHQLSSCFKSVAICIIAIFAVVSLMALGMKAEGDVLFSDFKQNMDLANIFIRITFIIFSSVILSRLVIDE
YKNKTIQLAFMYPLQRKMLMSAKLTIVFCFCFVSTIIATFIISLLVYFVSPMMGLIETPATIGEIIATVPGTIISAFMIS
GISLIPLFFGMRKKSTPTTITSAVIIGMLISGNVGAGNDQVSMFDFIAIPIVLCLLGIFISYLSFRKIDKIDVA
>Mature_234_residues
MLRLMKLEWKKHQLSSCFKSVAICIIAIFAVVSLMALGMKAEGDVLFSDFKQNMDLANIFIRITFIIFSSVILSRLVIDE
YKNKTIQLAFMYPLQRKMLMSAKLTIVFCFCFVSTIIATFIISLLVYFVSPMMGLIETPATIGEIIATVPGTIISAFMIS
GISLIPLFFGMRKKSTPTTITSAVIIGMLISGNVGAGNDQVSMFDFIAIPIVLCLLGIFISYLSFRKIDKIDVA

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25933; Mature: 25933

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLMKLEWKKHQLSSCFKSVAICIIAIFAVVSLMALGMKAEGDVLFSDFKQNMDLANIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH
IRITFIIFSSVILSRLVIDEYKNKTIQLAFMYPLQRKMLMSAKLTIVFCFCFVSTIIATF
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISLLVYFVSPMMGLIETPATIGEIIATVPGTIISAFMISGISLIPLFFGMRKKSTPTTI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHH
TSAVIIGMLISGNVGAGNDQVSMFDFIAIPIVLCLLGIFISYLSFRKIDKIDVA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MLRLMKLEWKKHQLSSCFKSVAICIIAIFAVVSLMALGMKAEGDVLFSDFKQNMDLANIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH
IRITFIIFSSVILSRLVIDEYKNKTIQLAFMYPLQRKMLMSAKLTIVFCFCFVSTIIATF
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISLLVYFVSPMMGLIETPATIGEIIATVPGTIISAFMISGISLIPLFFGMRKKSTPTTI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHH
TSAVIIGMLISGNVGAGNDQVSMFDFIAIPIVLCLLGIFISYLSFRKIDKIDVA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 10568751 [H]