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The map label for this gene is motA [H]

Identifier: 49187404

GI number: 49187404

Start: 4318444

End: 4319238

Strand: Reverse

Name: motA [H]

Synonym: BAS4409

Alternate gene names: 49187404

Gene position: 4319238-4318444 (Counterclockwise)

Preceding gene: 49187406

Following gene: 49187403

Centisome position: 82.61

GC content: 34.21

Gene sequence:

>795_bases
ATGGATTTTGCAACAATTATTGGACTTATTTTAGGATTTGTAGCAGTGGTAGTAGGGATGGTTGTCAAGGGCGCTGACGT
AACATCCTTATTGAATCCTGCCGCGGCATTAATTATTTTTATCGGTACATTAGCTGCAGTATGTATAGCCTTTCCGATGA
ATCAACTAAAAAGAGTTCCAAAATTATTTAAAGTTCTTTTTGGTTCAAATAAAAAGGATTTAAGTTATGAACAGTTGCTA
GAATTATTTGTTCATTGGACATCAGAAAGTAGAAAATACGGTATTTTGTCTTTAGAGCAACAATTAGACAAAATTCAAGA
TGAATTTCTTTTACGTGGTATGAAATTTGTAATTGATGGCGTATCTGCAGAAGATTTAGAACAGATTTTAGAAGCTGAAT
TAGAAGCAATTGAAGAAAGGCATGCAAAGGGAGCTGCAATTTTTTCTCAAGCTGGTACATATGCACCAACACTAGGGGTT
TTAGGTGCTGTTATCGGTCTTGTAGCTGCACTTGGTAATTTAACTGATATTGAAAAGTTAGGACATGCTATTTCAGGTGC
GTTTATTGCGACGATTTTTGGTATTTTTTCAGGTTATGTATTATGGCATCCATTTGCTAATAAGTTAAAACAAAAATCTG
CAGCTGAAATCGAAAAAAAGCGTTTAATCATTGATTGTTTATTAATGTTACAAGAAGGTACATATCCGTTTATTATGAAG
AACCGCATTTTAGGTTCACTATCTGCGACTGAGCGTAAAAAGCTAGAAAAAGGAGCAGAAAAAAATGCGGAGTAA

Upstream 100 bases:

>100_bases
TCTTTCATGAAATGAATTTTTTATGTAATATATATACATAAGAAGATGTAGCGATTATCGAGAATAAGGAACTTCTTGTA
TAGACTAGGAGTGAATGGGA

Downstream 100 bases:

>100_bases
GAAAAATAGAAGAGGCAAAAAGAAAAAACATGAGGAACATATTGATGAAACGTGGTTAATTCCATATTCTGACATGTTAA
CGTTGTTATTTGCACTGTTT

Product: flagellar motor protein MotA

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDFATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLFKVLFGSNKKDLSYEQLL
ELFVHWTSESRKYGILSLEQQLDKIQDEFLLRGMKFVIDGVSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGV
LGAVIGLVAALGNLTDIEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLIIDCLLMLQEGTYPFIMK
NRILGSLSATERKKLEKGAEKNAE

Sequences:

>Translated_264_residues
MDFATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLFKVLFGSNKKDLSYEQLL
ELFVHWTSESRKYGILSLEQQLDKIQDEFLLRGMKFVIDGVSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGV
LGAVIGLVAALGNLTDIEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLIIDCLLMLQEGTYPFIMK
NRILGSLSATERKKLEKGAEKNAE
>Mature_264_residues
MDFATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLFKVLFGSNKKDLSYEQLL
ELFVHWTSESRKYGILSLEQQLDKIQDEFLLRGMKFVIDGVSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGV
LGAVIGLVAALGNLTDIEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLIIDCLLMLQEGTYPFIMK
NRILGSLSATERKKLEKGAEKNAE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=270, Percent_Identity=24.8148148148148, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 28828; Mature: 28828

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]