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The map label for this gene is ywnA [H]

Identifier: 49187398

GI number: 49187398

Start: 4313814

End: 4314245

Strand: Reverse

Name: ywnA [H]

Synonym: BAS4403

Alternate gene names: 49187398

Gene position: 4314245-4313814 (Counterclockwise)

Preceding gene: 49187399

Following gene: 49187395

Centisome position: 82.51

GC content: 37.27

Gene sequence:

>432_bases
ATGGGGATTAGTAGTCGTTTTACAGTAGGTGTTCATATGCTGACATTACTTGCGATAGATCGAAACTCTCGCTGTACCTC
TGAATGGATTGCCGGTAGTGTGAATACAAATCCAGTTGTGATTCGTCGCATTACAGGAATGTTGAAGAGAGCAGGACTTG
TTGATGTACAAGCTGGTAAAGGTGGTACGACACTTGCTCGTGATTTAGAAGAAATTACATTACTTGATGTATATAAAGCA
GTGGAAGTTGTAGAAGAAGGACAGCTATTTTCCTTCCATGAAAATCCCAACATTGAATGTCCAGTAGGAGCTAATATTCA
ATCAGTATTAGAAATTATTTTAATGCAAGCGCAAGAAGCGATGGAAAACGTACTTGCAAATGTAACGGTAGATCAATTAG
TTACAAATTTAAAGTCTAAAATGAAAGAGTAA

Upstream 100 bases:

>100_bases
TTCTATTGAAATCATGCTTTTTCTTTATGTATAAATTAAAAATAGTATATAATAATAAGAGTCGTCTTTTAATAGAATGA
ATAAAAAGGAGGGTGTGCAG

Downstream 100 bases:

>100_bases
AAAAGCGAGCATCCTCATAATGAGGGCTCGCCTTTTTTTATTCAGAAATATTGAAAATTTTATTTTTCAGTATTTAAAAT
AAATTTGCCTACGATAGCTG

Product: rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGISSRFTVGVHMLTLLAIDRNSRCTSEWIAGSVNTNPVVIRRITGMLKRAGLVDVQAGKGGTTLARDLEEITLLDVYKA
VEVVEEGQLFSFHENPNIECPVGANIQSVLEIILMQAQEAMENVLANVTVDQLVTNLKSKMKE

Sequences:

>Translated_143_residues
MGISSRFTVGVHMLTLLAIDRNSRCTSEWIAGSVNTNPVVIRRITGMLKRAGLVDVQAGKGGTTLARDLEEITLLDVYKA
VEVVEEGQLFSFHENPNIECPVGANIQSVLEIILMQAQEAMENVLANVTVDQLVTNLKSKMKE
>Mature_142_residues
GISSRFTVGVHMLTLLAIDRNSRCTSEWIAGSVNTNPVVIRRITGMLKRAGLVDVQAGKGGTTLARDLEEITLLDVYKAV
EVVEEGQLFSFHENPNIECPVGANIQSVLEIILMQAQEAMENVLANVTVDQLVTNLKSKMKE

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15654; Mature: 15523

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISSRFTVGVHMLTLLAIDRNSRCTSEWIAGSVNTNPVVIRRITGMLKRAGLVDVQAGK
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCC
GGTTLARDLEEITLLDVYKAVEVVEEGQLFSFHENPNIECPVGANIQSVLEIILMQAQEA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
MENVLANVTVDQLVTNLKSKMKE
HHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GISSRFTVGVHMLTLLAIDRNSRCTSEWIAGSVNTNPVVIRRITGMLKRAGLVDVQAGK
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCC
GGTTLARDLEEITLLDVYKAVEVVEEGQLFSFHENPNIECPVGANIQSVLEIILMQAQEA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
MENVLANVTVDQLVTNLKSKMKE
HHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]