Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is spoVID [H]
Identifier: 49187352
GI number: 49187352
Start: 4268136
End: 4269119
Strand: Reverse
Name: spoVID [H]
Synonym: BAS4357
Alternate gene names: 49187352
Gene position: 4269119-4268136 (Counterclockwise)
Preceding gene: 49187353
Following gene: 49187351
Centisome position: 81.65
GC content: 36.99
Gene sequence:
>984_bases GTGGCAACAGATCATTCATTACGTTTTTCATTAAAAGAATCTGTTTGGTTCCAAAAAGGACAGGAAGTCGAAGAACTTTT GTCAATTTCGTTAGATCCAGACGTTGAGATAGAAGAGCTTGATCATGAGGTTATTGTGAGAGGGCAATTAGATTTAACGG GAGAGTATGTTGCAAGGCAAGATGATTCAGCTTATTCATTAAGAGATCTATCGCCAGCGAAGTCAATAGATTATGTAGAA ACAAGAGAAGATGGGGTTAATGAACTTGTTCATTCCTTTCCGCTTGAAATATCAATCCCAAGAAACCGTGTGAAAGTAAT TGAAGAACTATATGTATCCATCGAGGAATTTGATTATGAACTAAAGGAAAATGGTTGCTTACAATTATTAGCGGATATAT CTATTACAGGTTTATGTGATGAAGAACGCATCGAGGATGAAGAGGAAGAGGAAGAAACGGCGTATGCTGAGTTGGAAGTT GACTCAGCACAAGAGGAGGAAAATAGACCAACGCCGCACGTAGAAGAACCAGTTTATAAGGAATCAGATGAGTGGGAAGA TTATGCATTTGAACCGTTCCAACTAGAAGAAAGAAAAGAGCAGGAAGTAGAGGAAGAGGAAATAGAAGAACATGAATTTG TAGAGCGTGAAGAGGAGAAAGAAACAACGCCGCAATTTGAATTGTTCGGACGAAAAGATTTCAAGAAAGAACAAGCGAAA AAACAAGAAGAACAAGAAGAGGAAACGTATTCACAGCGAGATGAAAATGCGCTGTATTTAACGAAATTATTTACGAAAGA ACCGGAAGAAGAATTTACAAAGTTAAGAATGTATTTCGTGCAAGAAGGAGATACGATCGAATCGGTTGCAGAACGTTATG AAACATCTGTACAAAACTTATACCGTGTCAATCAAACAGAAGATATATATTTAACTACAGGACAAATTATTTATATTCCT GTTTCAAGAGCAAAAGCGAAATAA
Upstream 100 bases:
>100_bases GAAAATCGCTCTCCATAAGGGGAGCGATTTTTTTTATTCATAAAGTCAGCTTTCCGTACATAAATCTGTAATGACATATA GTTTGGGAGGGGGAAAAGAA
Downstream 100 bases:
>100_bases GTGAGTGTTTTCACTCACTTATTTTTCTAAAGGCTATGTTTTGAATAGAAAGGGTTATTCGTATGGATATGGAATTACGA AATCGCTATGAACCCATTGT
Product: stage VI sporulation protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVE TREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEEEETAYAELEV DSAQEEENRPTPHVEEPVYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEQAK KQEEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIP VSRAKAK
Sequences:
>Translated_327_residues MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVE TREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEEEETAYAELEV DSAQEEENRPTPHVEEPVYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEQAK KQEEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIP VSRAKAK >Mature_326_residues ATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVET REDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEEEETAYAELEVD SAQEEENRPTPHVEEPVYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEQAKK QEEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIPV SRAKAK
Specific function: Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018392 - InterPro: IPR002482 - InterPro: IPR014256 [H]
Pfam domain/function: PF01476 LysM [H]
EC number: NA
Molecular weight: Translated: 38669; Mature: 38537
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQ CCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHCC DDSAYSLRDLSPAKSIDYVETREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYE CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH LKENGCLQLLADISITGLCDEERIEDEEEEEETAYAELEVDSAQEEENRPTPHVEEPVYK HCCCCHHHHHHHCCEECCCCHHHCCCCHHHHHHHHHEEECCCCHHHCCCCCCCCCCCCCC ESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEQAK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH KQEEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNL HHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRVNQTEDIYLTTGQIIYIPVSRAKAK HHCCCCCEEEEECCEEEEEECCCCCCC >Mature Secondary Structure ATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQ CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHCC DDSAYSLRDLSPAKSIDYVETREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYE CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH LKENGCLQLLADISITGLCDEERIEDEEEEEETAYAELEVDSAQEEENRPTPHVEEPVYK HCCCCHHHHHHHCCEECCCCHHHCCCCHHHHHHHHHEEECCCCHHHCCCCCCCCCCCCCC ESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEQAK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH KQEEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNL HHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRVNQTEDIYLTTGQIIYIPVSRAKAK HHCCCCCEEEEECCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8449878; 9384377 [H]