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The map label for this gene is yvcS [H]

Identifier: 49187328

GI number: 49187328

Start: 4244909

End: 4246831

Strand: Reverse

Name: yvcS [H]

Synonym: BAS4333

Alternate gene names: 49187328

Gene position: 4246831-4244909 (Counterclockwise)

Preceding gene: 49187329

Following gene: 49187327

Centisome position: 81.22

GC content: 33.7

Gene sequence:

>1923_bases
ATGAACTTTCGCCAGCTCGCGCTTAATAATGTAAAAGGAAATTGGCGTAATTATAAAGCGTTTCTTATTAGCAGTTGTTT
ATCGATAGTCGTATTTTTCATGTATGCTTCCTTCATTTATCATCCAGATGTTGTAGGCGGTAATATTAGTATGAGGGAGA
TGATTTCAAAAGGGTTAGAATCGATGAATTATATTGTAGTCATCTTCTCAGCACTCTTTATTTTATATGCAAATTCAACA
TTTTTACGAGCAAGGAAAAAAGAGTTTGGTTTATTAACATTAATAGGCGGAACGAAATCTCAACTTGGCCGAATGATTAT
ATTAGAACAGCTTATGTTAGGTAGCATTGCAATTGTAGTAGGTATTGGACTTGGCATGCTTTGTTCAAAATTATTTTTCC
AAGCATTAAGCGTAATATTGAAAATAGATAAAACACTACCACTCGTATGGAATAGTAAAGCAGTTTTGATTACAGCAGGT
GTATACTTTATTCTATTTTTAATCTTATCATTGTTTAGCGTTTGGACAGTAGGACGCTTGCAAATTATTGATTTATTAAG
AGAAGCAAGAAAACAAAAAGTAGAACCTTTTGCATTTACATGGTTATGTGTAGTTGGTATAGGATGTATTATTGTGGCAT
ATGTACTTAGCTTCCAAGTAACATTTATGAATTTTATCATTCTCTTTTTACCGATTGTAGGGCTGACGATAGGCGGGACA
TATTTGCTGTTTACACAAGGTAGTACAGTCGTATTAAAAGCGTTACAAAAACGAAAAAAATCTTTTTATACATATCCAAA
TATGTTCGTACTTAGCAATCTTATTTATAAAATGAAAGATAATGCTCGTTTTCTATTTGTAATTTCTATCATTACGGCCG
TTGTATCTTCAGCAGTTGGTACGCTGTACGTATTTTTTGAGGATATGAGTTATAAGGCAGTAACTAGTACCCCGCATGCT
ATTTCGTATGAAGAAAAAGGCATTCATACGCATAATGTCATCAAAGAAGGAAAAACAAAAGAATTACTAAAAAAACACGG
GTTTGAAGATGCGCGAGAAGTAACGTACGTAAAACTTCCTGGAACTCAAAAAATCACGATGTTTAACAGTGAACATGAGA
TGCCAATGGCGATTGTTTCAGAAAAAGAATATAACGCTGAAGTACGTAAACAAAAAAGAGAGCAAGTTAGAGAAGTTCAT
AATGCCCCAGGTAGTGCAACGATGGTCATAACGGATATGGCGAACGATATGATGAAGATAGATCGTACGAAACCGCATGA
AATTAAAATTAACGGACAAACGCAGTCTGTTCAACTGAATAAGCCAACTTTATTTTCTGTTTTTAATGATAGTGAATATC
TCATTGTAAATGATCAAGATTTTGAGAAATACGCAAAGCTCGTACCGGATGAAGAAAAGACGAAATATTACGGTTATTAT
ATAGAAGACTGGAAAAGTACGGAAGATCTTGTGTTAGATTTGAAAAAGGAAATTGTACCAGATAAACAAGTGGAACTAAA
CAACTCAGTGCTTGTTTATAAAAATATAAGGGAATCAGGGGCAATTACAATGTTTATCGGTTTCTTCGTAGCAGTACTAT
TCTTCTTCTTCGCTTGTAGTATGACATACTTTAAATGGTTTAATGATAAAGAACAAGATCGTATTCAATTTAAATCGTTA
AAGAGAATCGGTATGACAGATAAAGAAATTCGTAAAATTGCAATTCGACAAATGGGCGTTATCTTCTTTATCCCAATTGT
AATTGGTGCCATTCATAGTGGATTTGCTCTTCATACGTTAGGAAAAATGCTTTATCTCGATTTATGGAAATCAGGTGCGA
TTGTAATTGGATCGTACATTGTAGCTTCTGCGATTTACTTTATAATCGCGCAAAGAGGATATTTGAAACACGTGAAAAGC
TAG

Upstream 100 bases:

>100_bases
CGCGATGGAGAGATTTTTTCAGAAATTCATAAAGGAAGAACGAAGCAAGCCTTTTTCCAAGAAATTCTGGACGTACTTGC
GATGCTAGGAGGAGAATATC

Downstream 100 bases:

>100_bases
AGAAATCTCTAGCTTTTTGCCTATGTAGTAAGTTATAGGGGGACGATAGATGAACATTCGGCAACTAGCGCTGCAAAATA
TAAAAGGAAATTGGCGTAAT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVGGNISMREMISKGLESMNYIVVIFSALFILYANST
FLRARKKEFGLLTLIGGTKSQLGRMIILEQLMLGSIAIVVGIGLGMLCSKLFFQALSVILKIDKTLPLVWNSKAVLITAG
VYFILFLILSLFSVWTVGRLQIIDLLREARKQKVEPFAFTWLCVVGIGCIIVAYVLSFQVTFMNFIILFLPIVGLTIGGT
YLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVGTLYVFFEDMSYKAVTSTPHA
ISYEEKGIHTHNVIKEGKTKELLKKHGFEDAREVTYVKLPGTQKITMFNSEHEMPMAIVSEKEYNAEVRKQKREQVREVH
NAPGSATMVITDMANDMMKIDRTKPHEIKINGQTQSVQLNKPTLFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYY
IEDWKSTEDLVLDLKKEIVPDKQVELNNSVLVYKNIRESGAITMFIGFFVAVLFFFFACSMTYFKWFNDKEQDRIQFKSL
KRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTLGKMLYLDLWKSGAIVIGSYIVASAIYFIIAQRGYLKHVKS

Sequences:

>Translated_640_residues
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVGGNISMREMISKGLESMNYIVVIFSALFILYANST
FLRARKKEFGLLTLIGGTKSQLGRMIILEQLMLGSIAIVVGIGLGMLCSKLFFQALSVILKIDKTLPLVWNSKAVLITAG
VYFILFLILSLFSVWTVGRLQIIDLLREARKQKVEPFAFTWLCVVGIGCIIVAYVLSFQVTFMNFIILFLPIVGLTIGGT
YLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVGTLYVFFEDMSYKAVTSTPHA
ISYEEKGIHTHNVIKEGKTKELLKKHGFEDAREVTYVKLPGTQKITMFNSEHEMPMAIVSEKEYNAEVRKQKREQVREVH
NAPGSATMVITDMANDMMKIDRTKPHEIKINGQTQSVQLNKPTLFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYY
IEDWKSTEDLVLDLKKEIVPDKQVELNNSVLVYKNIRESGAITMFIGFFVAVLFFFFACSMTYFKWFNDKEQDRIQFKSL
KRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTLGKMLYLDLWKSGAIVIGSYIVASAIYFIIAQRGYLKHVKS
>Mature_640_residues
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVGGNISMREMISKGLESMNYIVVIFSALFILYANST
FLRARKKEFGLLTLIGGTKSQLGRMIILEQLMLGSIAIVVGIGLGMLCSKLFFQALSVILKIDKTLPLVWNSKAVLITAG
VYFILFLILSLFSVWTVGRLQIIDLLREARKQKVEPFAFTWLCVVGIGCIIVAYVLSFQVTFMNFIILFLPIVGLTIGGT
YLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVGTLYVFFEDMSYKAVTSTPHA
ISYEEKGIHTHNVIKEGKTKELLKKHGFEDAREVTYVKLPGTQKITMFNSEHEMPMAIVSEKEYNAEVRKQKREQVREVH
NAPGSATMVITDMANDMMKIDRTKPHEIKINGQTQSVQLNKPTLFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYY
IEDWKSTEDLVLDLKKEIVPDKQVELNNSVLVYKNIRESGAITMFIGFFVAVLFFFFACSMTYFKWFNDKEQDRIQFKSL
KRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTLGKMLYLDLWKSGAIVIGSYIVASAIYFIIAQRGYLKHVKS

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 73060; Mature: 73060

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVGGNISMREMISKGLE
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SMNYIVVIFSALFILYANSTFLRARKKEFGLLTLIGGTKSQLGRMIILEQLMLGSIAIVV
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GIGLGMLCSKLFFQALSVILKIDKTLPLVWNSKAVLITAGVYFILFLILSLFSVWTVGRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCHH
QIIDLLREARKQKVEPFAFTWLCVVGIGCIIVAYVLSFQVTFMNFIILFLPIVGLTIGGT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
YLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVG
EEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TLYVFFEDMSYKAVTSTPHAISYEEKGIHTHNVIKEGKTKELLKKHGFEDAREVTYVKLP
EEEEEEECCCCEEECCCCCEECCCCCCCCHHHHHHCCCHHHHHHHCCCCCHHCEEEEECC
GTQKITMFNSEHEMPMAIVSEKEYNAEVRKQKREQVREVHNAPGSATMVITDMANDMMKI
CCEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
DRTKPHEIKINGQTQSVQLNKPTLFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYY
CCCCCCEEEECCCEEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCEEEEEE
IEDWKSTEDLVLDLKKEIVPDKQVELNNSVLVYKNIRESGAITMFIGFFVAVLFFFFACS
EECCCCHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
MTYFKWFNDKEQDRIQFKSLKRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTL
HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GKMLYLDLWKSGAIVIGSYIVASAIYFIIAQRGYLKHVKS
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVGGNISMREMISKGLE
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SMNYIVVIFSALFILYANSTFLRARKKEFGLLTLIGGTKSQLGRMIILEQLMLGSIAIVV
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GIGLGMLCSKLFFQALSVILKIDKTLPLVWNSKAVLITAGVYFILFLILSLFSVWTVGRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCHH
QIIDLLREARKQKVEPFAFTWLCVVGIGCIIVAYVLSFQVTFMNFIILFLPIVGLTIGGT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
YLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVG
EEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TLYVFFEDMSYKAVTSTPHAISYEEKGIHTHNVIKEGKTKELLKKHGFEDAREVTYVKLP
EEEEEEECCCCEEECCCCCEECCCCCCCCHHHHHHCCCHHHHHHHCCCCCHHCEEEEECC
GTQKITMFNSEHEMPMAIVSEKEYNAEVRKQKREQVREVHNAPGSATMVITDMANDMMKI
CCEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
DRTKPHEIKINGQTQSVQLNKPTLFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYY
CCCCCCEEEECCCEEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCEEEEEE
IEDWKSTEDLVLDLKKEIVPDKQVELNNSVLVYKNIRESGAITMFIGFFVAVLFFFFACS
EECCCCHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
MTYFKWFNDKEQDRIQFKSLKRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTL
HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GKMLYLDLWKSGAIVIGSYIVASAIYFIIAQRGYLKHVKS
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]