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The map label for this gene is yvcS [H]

Identifier: 49187327

GI number: 49187327

Start: 4242943

End: 4244859

Strand: Reverse

Name: yvcS [H]

Synonym: BAS4332

Alternate gene names: 49187327

Gene position: 4244859-4242943 (Counterclockwise)

Preceding gene: 49187328

Following gene: 49187326

Centisome position: 81.18

GC content: 33.75

Gene sequence:

>1917_bases
ATGAACATTCGGCAACTAGCGCTGCAAAATATAAAAGGAAATTGGCGTAATTACAAAGTGTTTTTCTTAAGTAGTTGTTT
TGCAATATTTGCGTCTTTTGCATACATGTCTGTCATTGTACATCCGTATATGCAGGATACGATGTGGTATCAAAACGTAC
GCTGGGGATTGATCATATGTAATGTTATTATCATTTCTTTTTTCGTCATATTTATTTTGTACTCTACTTCTATTTTCATA
GAAGCACGTAAGAAAGAATTAGGATTATATATGTTAATGGGAGCGACGAAATCTAACGTAATTGGCGTAATTATGACCGA
GCAAATGTTGGTCGGGGTATTTGCTAATATTTTTGGCATTGTGCTTGGCATGATCTTTTTAAAGCTCTTCTTTATGGTGT
TTAGTATGTTGCTGGGGCTTCCGAAAGAACTCCCTGTCATATTTGACTTGAAAGCGATTGGGGTAACGTTTATTACATAT
ATGGTTGTTTTTATTCTGTTATCTTTTATAAGTGCTTTACGTATATGGAACATAAAAATCATTCGGTTATTGAAAGAATT
TCGAACAGATAAAAAAGAGAAGAAAACGTCAATGTGGCTTTGTATATTCGGCTTTATTTGTTTAGGGATAGGATATGCGT
TAGCGTTACAAGCTACGATGCCAACGATAGCGTTATACTTCTTTTTGCCTGTGTCTATACTTGTCTTTTTCGGAACGTAT
TTTTCATTTACACATGGTACTGCTCAAATATTAGAAATGATAAAACGAAATAAAAAGATTATGTATACATATCCGTATTT
ATTTATAGTGAATCAATTGTCACATCGAATGAAGGAAAATGGTCGTTTTTTCTTTTTAATGTCAATGGCAACGATGTTTG
TAGTTACGGCAACAGGTACGGTGTTCTTATATTTTTCTGGTATGCAAGATATGTGGCGGGGCGGAGGAGTGCACTCATTT
TCTTACATAGAAAAAGGTACTTCTTCTCATGAAGTCTTTGCGGAAGGAACGGTTGAACAATTATTGCACCAATATGGGTA
TGATGATTTTCAATATAGGAGTTTTGTTGGAGTGTATGCATCTTTTCAGTCCAATAAGGGAGAAACGACAATAGTACCGC
TTATAAAAGGAAGTGAATATAACCAAGAAGCGAGGAAACAAAAACAGAAAACGTATTATCCTAAAAAAGGTACAGTGACA
CTCGTTTATTATAATAAATACAATAATTCGAATGTATATAATCAAAAAGAGATTCAATTGCAAGTAATGAATCAACCATA
TCAATTCGTATTTAACGGCCAGAAAGAAGGGATTCAATTTAACTATCATCCTTCGTATATTAACGGGCTGTTCTTCGTCA
TGAATGATGAAGACTTTGACAGTATAGCAAATCAGGTTCCTGATTCTGAAAAAATGATATATAGAGGCTATACATTACCA
AATATCGAAAATACGAAAGAATTAAATGAAGATTTACGGAAACATATGAAACAAGATAAAGATCATGCATTTCGAAGTAA
TATGGAGTTATATGTGAATATGAAATCGTTCGGTGATATTACTCTATTTCTAGGCTCATTCATTAGTATATTATTTTTCC
TTACATCATGTAGCATCGTATATTTTAAATGGTTCCATAATATTGCATCGGACCGAAAGCAGTACGGGGTGCTCTCTAAA
CTGGGAATGACAAAGGAAGAAGTATGGAAGATTTCCCGCTGGCAATTATGTATGCTATTTTTTGCGCCAATTATAGTAGG
GAGTATGCATAGTGCAGTTGCGTTATATACGTTTCATAATATGATGTTTATGGATGGTTCATTAAGAAAAGTAGGCTTGT
TTATTCTATTTTATATCGCTGCATGCATCATGTATTTCTTTTTCGCTCAAAGAGAATATAGGGAACATTTAGACTAG

Upstream 100 bases:

>100_bases
ATTTACTTTATAATCGCGCAAAGAGGATATTTGAAACACGTGAAAAGCTAGAGAAATCTCTAGCTTTTTGCCTATGTAGT
AAGTTATAGGGGGACGATAG

Downstream 100 bases:

>100_bases
CGAATGCTAGTCTTTTTTAAATATTCAAAATTTACATAGAAGAATATAAAAAAGTATGGTATAACAGTAAGAAAACGAAA
AAGAGGGGAAAAGACGATGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQDTMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSNVIGVIMTEQMLVGVFANIFGIVLGMIFLKLFFMVFSMLLGLPKELPVIFDLKAIGVTFITY
MVVFILLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALQATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFLMSMATMFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDKDHAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSK
LGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYREHLD

Sequences:

>Translated_638_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQDTMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSNVIGVIMTEQMLVGVFANIFGIVLGMIFLKLFFMVFSMLLGLPKELPVIFDLKAIGVTFITY
MVVFILLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALQATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFLMSMATMFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDKDHAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSK
LGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYREHLD
>Mature_638_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQDTMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSNVIGVIMTEQMLVGVFANIFGIVLGMIFLKLFFMVFSMLLGLPKELPVIFDLKAIGVTFITY
MVVFILLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALQATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFLMSMATMFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDKDHAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSK
LGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYREHLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 74614; Mature: 74614

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQDTMWYQNVRWGLIIC
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVIIISFFVIFILYSTSIFIEARKKELGLYMLMGATKSNVIGVIMTEQMLVGVFANIFGI
HHHHHHHHHHHHHHHHHHEEEEHHHHCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHH
VLGMIFLKLFFMVFSMLLGLPKELPVIFDLKAIGVTFITYMVVFILLSFISALRIWNIKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALQATMPTIALYFFLPVSILVFFGTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFLMSMATMFVVTATGT
HHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCE
VFLYFSGMQDMWRGGGVHSFSYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYA
EEEEECCHHHHHCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
SFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVTLVYYNKYNNSNVYNQKEIQL
HHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEE
QVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
EECCCCEEEEECCCCCCEEEECCCHHHCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC
NIENTKELNEDLRKHMKQDKDHAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIV
CCCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YFKWFHNIASDRKQYGVLSKLGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMFMDGSLRKVGLFILFYIAACIMYFFFAQREYREHLD
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQDTMWYQNVRWGLIIC
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVIIISFFVIFILYSTSIFIEARKKELGLYMLMGATKSNVIGVIMTEQMLVGVFANIFGI
HHHHHHHHHHHHHHHHHHEEEEHHHHCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHH
VLGMIFLKLFFMVFSMLLGLPKELPVIFDLKAIGVTFITYMVVFILLSFISALRIWNIKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALQATMPTIALYFFLPVSILVFFGTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFLMSMATMFVVTATGT
HHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCE
VFLYFSGMQDMWRGGGVHSFSYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYA
EEEEECCHHHHHCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
SFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVTLVYYNKYNNSNVYNQKEIQL
HHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEE
QVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
EECCCCEEEEECCCCCCEEEECCCHHHCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC
NIENTKELNEDLRKHMKQDKDHAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIV
CCCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YFKWFHNIASDRKQYGVLSKLGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMFMDGSLRKVGLFILFYIAACIMYFFFAQREYREHLD
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]