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The map label for this gene is spoVB [H]

Identifier: 49187303

GI number: 49187303

Start: 4221749

End: 4223308

Strand: Direct

Name: spoVB [H]

Synonym: BAS4308

Alternate gene names: 49187303

Gene position: 4221749-4223308 (Clockwise)

Preceding gene: 49187291

Following gene: 49187305

Centisome position: 80.74

GC content: 37.24

Gene sequence:

>1560_bases
ATGACGAGACAAAGCTTTTTAAAAGGCGCATTTATTTTAATGATCGCCGGCTTTATTACCAAAATTCTAGGATTTATTAA
CCGTATTGTAATGGCACGTATTTTAGGAGAAGAAGGCGTTGGCCTTTATATGATGGCCGTCCCTACATTTATTCTAGCAA
TTACATTAACACAAATCGGTCTTCCTGTCGCAATCGCAAAATTTGTAGCAGAAGCGGAAGCTGTGAACGATAAACAAAAA
GTTAAAAAAATATTAACAGTATCATTAGCTGTTACATCCGTTATTAGTATCGTTTTAACAATTGGAATTATGCTCCTCAC
ACCTATTTTAGCAAAAACATTATTAACTGATGAACGAACGTATTATCCATTAATGGCTATTTTACCTGTCGTTCCTGTTA
TTGCTGTTTCTTCTGTTTTACGTGGTTATTTTCAGGGGAAACAAAATATGAAACCTAGCGCTTATGCCCAAGTTATTGAA
CAAATTGTCCGTATTACAATTATCGCTATATGTATTCAATTATTTTTACCTTACGGCGTAGAATATGCTGCAGCTGGCGC
TATGTTATCAGCCGTTCTCGGTGAAGTGGCATCATTATTATTTTTACTTACTTTATTCCAGCGCGAAAAACATTTATCTA
TACGCTCTGGATTTTTCACTACTGTAAAGGAGAGCAAAGGAACATTTTATTCTCTTATGGATATTGCACTTCCAACTACA
GGAAGTCGTTTAATCGGTTCCGTTTCCTATTTTTTTGAACCTATCGTCGTTATGCAAAGCTTAGCGATTGCCGGCGTTGC
TGCCTCCGTCGCAACCCAGCAATACGGTATATTAAACGGGTATGCATTCCCGCTCCTTTCACTGCCAGCCTTTATTACAT
ACGCTCTCTCTACAGCACTCGTTCCATCTATTAGCGAGGCAATGGCAAAGAGGCAGCATAAATTAGTAGAACACCGCTTA
CAACAAGCTCTTCGAATCTCATTGATTACTGGTGGATGGTCAGTCGTTATATTATATGTATTTGCTTCTCCTGTTTTAAC
TCTTATGTATGGATCGGATAGTGCAACAGCATTCATCCAGCTTCTTGCACCTTGCTTTTTATTTCACTATTTTCAAAGTC
CACTTACCTCTGTTTTACAAGCTTTAAACTTAGCACGTGCGGCCATGATGAATACATTTATTGGTGCAATCGTGAAATTA
ATCGTTATTTTTGTACTAGCTTCAAGGCCAGAGTTTCAAATGATGGGGGTTGCCCTTGCAATTGCAGCAAATATCGTAAC
AGTAACATTTCTTCATTACGCTACTGTTTTAAAGAAAATTACATTTACCATTTACGCAAAAGACTATATTTTTGGCGGAC
TTGCCATCGGTATCGCAGGCTCTTTCGGTTTTTACCTTCATAAGTATATAATTTTCTCTCATTCACTTGGCATACAAACA
TTATGGGAAATCACTTTAACAACACTCGTTTATATTGTGCTCCTCTTCAGTTTCAAACTCATTCGAAAAGAAGAGTTAAG
TCGTCTCCCTATCATTCGAAAACTTTCATTTTTGAAGTAA

Upstream 100 bases:

>100_bases
TCAAGAGCATACTCTCTTAAATGCTTGTCATTCTTGTCTCGTACGCGCATATAAATTATTGTAAATCATTCCACTGATTT
TGAGAAGGTAGGAGAAGACC

Downstream 100 bases:

>100_bases
ACAGGCTTACTACGTCGTATAGTAAGCCTCTAGTTTTCTTTTAAATCAACAAAAAATTGTCCATTTTGAAAGCTACAGTA
TAAAATTTGCGCGATATCGT

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MTRQSFLKGAFILMIAGFITKILGFINRIVMARILGEEGVGLYMMAVPTFILAITLTQIGLPVAIAKFVAEAEAVNDKQK
VKKILTVSLAVTSVISIVLTIGIMLLTPILAKTLLTDERTYYPLMAILPVVPVIAVSSVLRGYFQGKQNMKPSAYAQVIE
QIVRITIIAICIQLFLPYGVEYAAAGAMLSAVLGEVASLLFLLTLFQREKHLSIRSGFFTTVKESKGTFYSLMDIALPTT
GSRLIGSVSYFFEPIVVMQSLAIAGVAASVATQQYGILNGYAFPLLSLPAFITYALSTALVPSISEAMAKRQHKLVEHRL
QQALRISLITGGWSVVILYVFASPVLTLMYGSDSATAFIQLLAPCFLFHYFQSPLTSVLQALNLARAAMMNTFIGAIVKL
IVIFVLASRPEFQMMGVALAIAANIVTVTFLHYATVLKKITFTIYAKDYIFGGLAIGIAGSFGFYLHKYIIFSHSLGIQT
LWEITLTTLVYIVLLFSFKLIRKEELSRLPIIRKLSFLK

Sequences:

>Translated_519_residues
MTRQSFLKGAFILMIAGFITKILGFINRIVMARILGEEGVGLYMMAVPTFILAITLTQIGLPVAIAKFVAEAEAVNDKQK
VKKILTVSLAVTSVISIVLTIGIMLLTPILAKTLLTDERTYYPLMAILPVVPVIAVSSVLRGYFQGKQNMKPSAYAQVIE
QIVRITIIAICIQLFLPYGVEYAAAGAMLSAVLGEVASLLFLLTLFQREKHLSIRSGFFTTVKESKGTFYSLMDIALPTT
GSRLIGSVSYFFEPIVVMQSLAIAGVAASVATQQYGILNGYAFPLLSLPAFITYALSTALVPSISEAMAKRQHKLVEHRL
QQALRISLITGGWSVVILYVFASPVLTLMYGSDSATAFIQLLAPCFLFHYFQSPLTSVLQALNLARAAMMNTFIGAIVKL
IVIFVLASRPEFQMMGVALAIAANIVTVTFLHYATVLKKITFTIYAKDYIFGGLAIGIAGSFGFYLHKYIIFSHSLGIQT
LWEITLTTLVYIVLLFSFKLIRKEELSRLPIIRKLSFLK
>Mature_518_residues
TRQSFLKGAFILMIAGFITKILGFINRIVMARILGEEGVGLYMMAVPTFILAITLTQIGLPVAIAKFVAEAEAVNDKQKV
KKILTVSLAVTSVISIVLTIGIMLLTPILAKTLLTDERTYYPLMAILPVVPVIAVSSVLRGYFQGKQNMKPSAYAQVIEQ
IVRITIIAICIQLFLPYGVEYAAAGAMLSAVLGEVASLLFLLTLFQREKHLSIRSGFFTTVKESKGTFYSLMDIALPTTG
SRLIGSVSYFFEPIVVMQSLAIAGVAASVATQQYGILNGYAFPLLSLPAFITYALSTALVPSISEAMAKRQHKLVEHRLQ
QALRISLITGGWSVVILYVFASPVLTLMYGSDSATAFIQLLAPCFLFHYFQSPLTSVLQALNLARAAMMNTFIGAIVKLI
VIFVLASRPEFQMMGVALAIAANIVTVTFLHYATVLKKITFTIYAKDYIFGGLAIGIAGSFGFYLHKYIIFSHSLGIQTL
WEITLTTLVYIVLLFSFKLIRKEELSRLPIIRKLSFLK

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 56958; Mature: 56827

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
TRQSFLKGAFILMIAGFITKILGFINRIVMARILGEEGVGLYMMAVPTFILAITLTQIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]