Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ytrB [H]
Identifier: 49187122
GI number: 49187122
Start: 4046395
End: 4047267
Strand: Reverse
Name: ytrB [H]
Synonym: BAS4125
Alternate gene names: 49187122
Gene position: 4047267-4046395 (Counterclockwise)
Preceding gene: 49187123
Following gene: 49187121
Centisome position: 77.41
GC content: 34.71
Gene sequence:
>873_bases ATGTTAGAGCTAAAAAACGTTTGTAAAAGTTATGAAGATTTTGCAGTGAAAAATATAAGTTTTACGTTACCACGCGGATA TATTATGGGATTTGTCGGACCGAATGGGGCCGGGAAAAGTACGACAATCAAAATGATTATGAATTTAATTAAAAAAGATA GCGGCGAAATAAAAATTTTTGGCAAGGACAATAAGAAAGCCGAAAAGGAAATAAAACAAAATATCGGCTTTGTATACGAT GAAAATCATTATTACGAAGATTTAACGTGCGAACAAATGAAACGTATTATTGCACCGTTATATAAAAAGTGGGATGAAGA GCAGTATCAATCGTATATGCATAGATTGCAAGTTCCAAAGTATAAAAAAATTAAAGAACTATCAAAAGGGATGAAAATGA AATTTGCGATTGCCATCGCGCTCTCGCACCACGCAGAGTTTATCATCATGGATGAACCAACAGCAGGATTAGATCCAGTT GTTCGAAGTGAATTGCTTGATATGTTGCAAGAGATTGTAATGGAAGATGAAGTATCTGTATTATTCTCAACTCATATTAC AACAGACTTAGAGCGCATCGCAGATTATATTACGTTCATCAATGATGGAGAAATTATATTTACTGGTGAAAAAGACGACT TAATGGAGAACTACGTAATCGTAAAAGGAAGTAATGATTTATTAGACCGAGAAGGAAAAGAACTATTTGTTGGATTACGA AAAAATAAATTTGGTTTTGAAGGTTTAGCGAAGGATAAACAAACAATTATCGACTGGTTTGGAAATGAGGTTGTACTAGA AAAGCCTACATTGGACGAGATCATCGTTTACACCGCGAAAGGAAGAGGTGCCTATGCGTCAGCTCGTATATAA
Upstream 100 bases:
>100_bases AAGTAAAGCGGAAGAGATTGTGAATGAAAGTAAAGCGTTGCAGCTTTCACTTGAAGATTTACAGCAGATGATAGCGTGTT TATATGAGGGGGAATAAAGG
Downstream 100 bases:
>100_bases AGATTTGTTCTTTTTTCGGGTAACGTGGTTAGTGAATTTTGTTATGCCACTTTTGTTATTTATGTTAGATCCAAGTGGTG AAGAGTTATTTCCGATGAGT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKDDLMENYVIVKGSNDLLDREGKELFVGLR KNKFGFEGLAKDKQTIIDWFGNEVVLEKPTLDEIIVYTAKGRGAYASARI
Sequences:
>Translated_290_residues MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKDDLMENYVIVKGSNDLLDREGKELFVGLR KNKFGFEGLAKDKQTIIDWFGNEVVLEKPTLDEIIVYTAKGRGAYASARI >Mature_290_residues MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKDDLMENYVIVKGSNDLLDREGKELFVGLR KNKFGFEGLAKDKQTIIDWFGNEVVLEKPTLDEIIVYTAKGRGAYASARI
Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=225, Percent_Identity=29.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI30795238, Length=225, Percent_Identity=29.3333333333333, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=30.1435406698565, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=30.1435406698565, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=30, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI105990541, Length=214, Percent_Identity=28.5046728971963, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27436953, Length=219, Percent_Identity=26.4840182648402, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31657092, Length=226, Percent_Identity=29.2035398230088, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI153792144, Length=243, Percent_Identity=26.3374485596708, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI6005701, Length=226, Percent_Identity=26.1061946902655, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=28.2296650717703, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI27477115, Length=226, Percent_Identity=26.5486725663717, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=26.2376237623762, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI27262624, Length=210, Percent_Identity=23.8095238095238, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI27262626, Length=210, Percent_Identity=23.8095238095238, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI9665248, Length=257, Percent_Identity=23.7354085603113, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI21536378, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9955963, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI9961252, Length=230, Percent_Identity=26.9565217391304, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=26.9565217391304, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=33.1818181818182, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI48994943, Length=221, Percent_Identity=29.4117647058824, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=31.6037735849057, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=30.5309734513274, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=29.3859649122807, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=26.5765765765766, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=27.1604938271605, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789890, Length=228, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787089, Length=226, Percent_Identity=26.1061946902655, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=25.2293577981651, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788506, Length=212, Percent_Identity=29.2452830188679, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=23.2558139534884, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=26.1682242990654, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=25, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=28.099173553719, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=25.1141552511416, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994997, Length=235, Percent_Identity=25.1063829787234, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786398, Length=243, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=28.7128712871287, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=29.7169811320755, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=29.7413793103448, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=25.5411255411255, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=24.8888888888889, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=27.6785714285714, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=24.6696035242291, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788540, Length=179, Percent_Identity=31.2849162011173, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=27.6497695852535, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787547, Length=250, Percent_Identity=25.6, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787548, Length=227, Percent_Identity=25.1101321585903, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=22.6086956521739, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789586, Length=218, Percent_Identity=25.6880733944954, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786975, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=25.8620689655172, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=22.9074889867841, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=23.3333333333333, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=21.9409282700422, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787143, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790162, Length=231, Percent_Identity=22.9437229437229, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082268, Length=228, Percent_Identity=21.0526315789474, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788897, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=24.7619047619048, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=24.3243243243243, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=28.4444444444444, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71983516, Length=212, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71983510, Length=212, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=28.5046728971963, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=28.3783783783784, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202878, Length=189, Percent_Identity=26.4550264550265, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193208177, Length=213, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI24666092, Length=200, Percent_Identity=29.5, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24582014, Length=238, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24582012, Length=238, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI85725262, Length=211, Percent_Identity=27.9620853080569, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24650853, Length=208, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24650855, Length=208, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI281362751, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI116007328, Length=204, Percent_Identity=29.9019607843137, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574150, Length=204, Percent_Identity=29.9019607843137, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=25.9414225941423, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI221500365, Length=196, Percent_Identity=24.4897959183673, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI116007184, Length=196, Percent_Identity=24.4897959183673, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI28573571, Length=230, Percent_Identity=24.7826086956522, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24648314, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI28574744, Length=202, Percent_Identity=24.2574257425743, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI221500419, Length=209, Percent_Identity=24.4019138755981, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI281363262, Length=214, Percent_Identity=26.1682242990654, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24653245, Length=214, Percent_Identity=26.1682242990654, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI21357907, Length=232, Percent_Identity=27.1551724137931, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 33317; Mature: 33317
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPK ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH LFSTHITTDLERIADYITFINDGEIIFTGEKDDLMENYVIVKGSNDLLDREGKELFVGLR HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC KNKFGFEGLAKDKQTIIDWFGNEVVLEKPTLDEIIVYTAKGRGAYASARI CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPK ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH LFSTHITTDLERIADYITFINDGEIIFTGEKDDLMENYVIVKGSNDLLDREGKELFVGLR HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC KNKFGFEGLAKDKQTIIDWFGNEVVLEKPTLDEIIVYTAKGRGAYASARI CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]