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The map label for this gene is ykyA [H]

Identifier: 49186904

GI number: 49186904

Start: 3853941

End: 3854603

Strand: Reverse

Name: ykyA [H]

Synonym: BAS3906

Alternate gene names: 49186904

Gene position: 3854603-3853941 (Counterclockwise)

Preceding gene: 49186905

Following gene: 49186902

Centisome position: 73.72

GC content: 26.7

Gene sequence:

>663_bases
ATGTTGAAATATAGTAAATTAGCAATTGTAACTGCATTATCAATGACTTTACTAGCCGGTTGTTTCGGACCAAAACCAGA
AGAGGAATTATATGTTGCGTTTGAAAATGCTGCAAAGCAAGAAAAAACAATGTTTGAAGATGCAAAAAAACTTGAAACTT
TAGAGAAAGAGGGACAAGAGTTATATAACCAGATTGTTCAAGAAGGAAAAGATAATAATCAAACTGTTAAGGAAAAACTG
AACCAAGCAGTGAAAAATACAGATGAACGAGAAAAAGTGCTTAAAAAAGAAAAAGAATCTTTAAATAAGGCGCAAGAAGA
AGTGAAATCAGCAGATAAATATGTGAAGAAAATTGAAGATAAGAAATTGAAAGATCAAGCGGATAAAGTAAAAAGTACAT
ATGAGAAACGACATGATTCATTTAATAAAATGTATGACAGCTATAATAAATCGTTAAAACAAGAAAAAGAATTATATACA
ATGTTACAAGATAAAGGTACAAAATTAAAAGATATTAGTGAAAAAGTAAAAGTAGTAAATCAATCTTATAAGGATATTGA
TTCAGAAAAAGATAAGTTTAATGAATTCACGAAATCTTATAATACAGAAAAAATAGCTTTTTATAAACAAGCAAATATTA
AAATTAAAGAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
ATTTTCGTAAAAAAGGTGCGAGTGTGGAGTTTTGTTTATAGAAGGATATATAATTTCATAGCTTTTTACACGATGATCGT
ATATAAGTAGGAGGAAAAAG

Downstream 100 bases:

>100_bases
AACAGTTTGGCCTACAATTGGCCAAACTGTTTTATTTTTTTGTATAAGTACGACTATACCATGGAACAGGTTCACTTAAT
TTTTTTTCTTGTTTTAGCGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLKYSKLAIVTALSMTLLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTDEREKVLKKEKESLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIDSEKDKFNEFTKSYNTEKIAFYKQANIKIKEEKK

Sequences:

>Translated_220_residues
MLKYSKLAIVTALSMTLLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTDEREKVLKKEKESLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIDSEKDKFNEFTKSYNTEKIAFYKQANIKIKEEKK
>Mature_220_residues
MLKYSKLAIVTALSMTLLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTDEREKVLKKEKESLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIDSEKDKFNEFTKSYNTEKIAFYKQANIKIKEEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019454 [H]

Pfam domain/function: PF10368 YkyA [H]

EC number: NA

Molecular weight: Translated: 25775; Mature: 25775

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYSKLAIVTALSMTLLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNQIVQEGKDNNQTVKEKLNQAVKNTDEREKVLKKEKESLNKAQEEVKSADKYVKKIED
HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYTMLQDKGTKLKDISEKVKVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QSYKDIDSEKDKFNEFTKSYNTEKIAFYKQANIKIKEEKK
HHHHHCCHHHHHHHHHHHHCCCHHHHEEECCCCEECCCCC
>Mature Secondary Structure
MLKYSKLAIVTALSMTLLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNQIVQEGKDNNQTVKEKLNQAVKNTDEREKVLKKEKESLNKAQEEVKSADKYVKKIED
HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYTMLQDKGTKLKDISEKVKVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QSYKDIDSEKDKFNEFTKSYNTEKIAFYKQANIKIKEEKK
HHHHHCCHHHHHHHHHHHHCCCHHHHEEECCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1697575; 8969500; 9384377 [H]