Click here to switch to the map view.

The map label for this gene is 49186828

Identifier: 49186828

GI number: 49186828

Start: 3785174

End: 3785401

Strand: Reverse

Name: 49186828

Synonym: BAS3830

Alternate gene names: NA

Gene position: 3785401-3785174 (Counterclockwise)

Preceding gene: 49186830

Following gene: 49186827

Centisome position: 72.4

GC content: 31.58

Gene sequence:

>228_bases
ATGGGAAAGAAACGACATAATTTAATTAAAGCTCGCAAACGTAAAAATTTTACCCAGGAACAACTAGGGGCATTGATAAA
TAAACAGAAAACGGTAATCAGTAATTGGGAAACTGGCTACGCAACTCCAACATTAGATGATGCAATGCAAATAGCGCAAA
TATTAGAAGAAGATATATATAATCTTTTTTTAGGTGTGGAAGTTCAAGAAAATCAAACTTTATTTTAA

Upstream 100 bases:

>100_bases
AATCCAAAAAAACTCAAATATTATTATTGGCAGTACAAAAAACTTGGATATATAATGAGTGTAACAAGTTCAAGAAAGTT
GGATTTTAGGAGGTGTCATC

Downstream 100 bases:

>100_bases
AAAGTTCAATTGTAGGATGAATTAAATGAAAAATGAAAAGGGGCTAAAAACATGTACCAAATAAAACAATTACCATTTTC
ACTGAAAGCAGAGGACGTAC

Product: prophage LambdaBa02, DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MGKKRHNLIKARKRKNFTQEQLGALINKQKTVISNWETGYATPTLDDAMQIAQILEEDIYNLFLGVEVQENQTLF

Sequences:

>Translated_75_residues
MGKKRHNLIKARKRKNFTQEQLGALINKQKTVISNWETGYATPTLDDAMQIAQILEEDIYNLFLGVEVQENQTLF
>Mature_74_residues
GKKRHNLIKARKRKNFTQEQLGALINKQKTVISNWETGYATPTLDDAMQIAQILEEDIYNLFLGVEVQENQTLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8695; Mature: 8564

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKRHNLIKARKRKNFTQEQLGALINKQKTVISNWETGYATPTLDDAMQIAQILEEDIY
CCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
NLFLGVEVQENQTLF
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
GKKRHNLIKARKRKNFTQEQLGALINKQKTVISNWETGYATPTLDDAMQIAQILEEDIY
CCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
NLFLGVEVQENQTLF
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA