Click here to switch to the map view.

The map label for this gene is yhdN [C]

Identifier: 49185516

GI number: 49185516

Start: 2509170

End: 2509664

Strand: Reverse

Name: yhdN [C]

Synonym: BAS2508

Alternate gene names: 49185516

Gene position: 2509664-2509170 (Counterclockwise)

Preceding gene: 49185517

Following gene: 49185515

Centisome position: 48.0

GC content: 33.54

Gene sequence:

>495_bases
GTGTGGTGGCGAGAAAAGCTATTCGATGGATTAAGGGCATTAGAACTTACAAAAACGACACTAAAAAATAAAAAGGAGAG
AGAATCTATGAATCAAGAAGAACTAGATAAAAAACTAAAAAAGCAAGAGATTTTAGTAAAAGATGAGAAAGTTTGGTCCT
ATACGTATGAGGATCATATTAGTTCTATCGTTAAAGAGGCAGAAAAGAAAGGGGCTTTCGATCATTTACCTGGTAAAGGG
AAACCTCTTAATCTTGATAAAGACCTTTCGTACAATCCTGAAAAGCAACTGTATAGAACTTTGAAAAATAATCATGTTTT
ACCTAGGTGGATTGAGCTTTCAAAGGAAATTGATGACTTAAAAGAAAAACTAAAAGAAAATACAAATACTGCAGAAGCAG
CGGATTTAACTCGAACTATTAATAAAAAGGTTTTAGAACATAACCTACTTTGTCCACCAAGTGCGCAAAAAACGAGGGTG
AAAACGGACTTTTAA

Upstream 100 bases:

>100_bases
AACGAATCTCTTTTAAAGGCTAATAGACGGCTACATAAAGCTTTAGAAGAAAAGAAATACCCAAACCACTTATGAAGAGT
TTCAAGGCGGACATGATAGC

Downstream 100 bases:

>100_bases
CAATTTTTAATAAAGCTATTTCTTGCTATATAATTAAGTAAGACATTTTCAATTCATTATGAAAGGGAGGCAAATGTGAT
GAAAAATACGTATCAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MWWREKLFDGLRALELTKTTLKNKKERESMNQEELDKKLKKQEILVKDEKVWSYTYEDHISSIVKEAEKKGAFDHLPGKG
KPLNLDKDLSYNPEKQLYRTLKNNHVLPRWIELSKEIDDLKEKLKENTNTAEAADLTRTINKKVLEHNLLCPPSAQKTRV
KTDF

Sequences:

>Translated_164_residues
MWWREKLFDGLRALELTKTTLKNKKERESMNQEELDKKLKKQEILVKDEKVWSYTYEDHISSIVKEAEKKGAFDHLPGKG
KPLNLDKDLSYNPEKQLYRTLKNNHVLPRWIELSKEIDDLKEKLKENTNTAEAADLTRTINKKVLEHNLLCPPSAQKTRV
KTDF
>Mature_164_residues
MWWREKLFDGLRALELTKTTLKNKKERESMNQEELDKKLKKQEILVKDEKVWSYTYEDHISSIVKEAEKKGAFDHLPGKG
KPLNLDKDLSYNPEKQLYRTLKNNHVLPRWIELSKEIDDLKEKLKENTNTAEAADLTRTINKKVLEHNLLCPPSAQKTRV
KTDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19362; Mature: 19362

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWREKLFDGLRALELTKTTLKNKKERESMNQEELDKKLKKQEILVKDEKVWSYTYEDHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSIVKEAEKKGAFDHLPGKGKPLNLDKDLSYNPEKQLYRTLKNNHVLPRWIELSKEIDDL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KEKLKENTNTAEAADLTRTINKKVLEHNLLCPPSAQKTRVKTDF
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWWREKLFDGLRALELTKTTLKNKKERESMNQEELDKKLKKQEILVKDEKVWSYTYEDHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSIVKEAEKKGAFDHLPGKGKPLNLDKDLSYNPEKQLYRTLKNNHVLPRWIELSKEIDDL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KEKLKENTNTAEAADLTRTINKKVLEHNLLCPPSAQKTRVKTDF
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA