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The map label for this gene is ykuC [H]

Identifier: 49185236

GI number: 49185236

Start: 2231835

End: 2232995

Strand: Direct

Name: ykuC [H]

Synonym: BAS2227

Alternate gene names: 49185236

Gene position: 2231835-2232995 (Clockwise)

Preceding gene: 49185235

Following gene: 49185237

Centisome position: 42.68

GC content: 33.51

Gene sequence:

>1161_bases
ATGTTTTATTTGCTAGATCAATACGGAAAACAACCAGTTTACGCAACAATGACACAAATTATGATTGCATTACCTGCATT
AATCTTTTTTCTATTAGTAGGGACAGTAGTGGATCGTTTTGATAGACAACGTATTTGTACAGTAAGTAACATATGTTGTT
CACTCTGTAATATCGGAATTCTAATTTCGCTTTATTACGGGATGATTATACTTGTCTTTCTATTTTTATTTTTAGAAAAT
GCATGTATACAATTTTTCTCTCCATCAGAACAGTCGATGATACAGGGAGTAGTTGAATCAGACCAATATGGTGCAGCAGC
GGGGATTAATCAAATGGTAAATAGTTTGTATGCCTTGTTTGGTGTAGGAATTGCAACGATGGTGTACTGGACTTTTGGAA
TTTACGGGAGCATTTTAGTAAATACGCTCACATTTATTATGAGTGGTATTTTGATTCAAACGATCTCCATTCCAGAAAAA
GTTCGTTTGCCAAATGGTAGAACAAAATGGAAAGAAGTTAATTTAAAAATGTTAATAACAGAGTTTAAAGAAGGGATTAG
GTATATATACCAAAATGAAACTTTAAAAAAATTACTTTTAGGATTTATCGTATTTGGACTATTAAATGGTATTTTAAGCG
TATCTACTACTTACATATTAAAATACAAATTAGCACCAGCTACGTATGAAAGTTTAGCAATGGTAGGCGGTGTAGTTGGA
GGGATTTCATTACTAATTGGAAGTATAGTAGCAACGAGTATAGGTAAGAAATATGCGCCAAAACCTATTATAGTTTTTGG
TATGGCGGGCTCAGGGATCTTTTTCGGTATGTGTTACTTTGTAAATTACGTATGGTCTTTTTATGTATGTATTGCTTTTG
CGACTTTCTTTTTACCGTTTATTAATGTTGCAATAATGGGCTGGATGTATGAAATTGTAGAAGAGTCATTTATGGGGCGC
GTTCAAAGTTTACTTAGTCCATTAACGACAGGATTCCAGCTTTTATCTCTCGGTGCGATAGCAATGTTATTCCCGAAATG
GATTCGTGCAGATACATTGTATATCATTTTATTTGGTTTATTACTTTTTGTTACATGTTTATATCAAGCTATTCTACCTA
GTGGGCAAAAGCGAGTACATGTTGTCGCTAAAGAAATGTGA

Upstream 100 bases:

>100_bases
GAAAGAAATGCTACAGTTATTTCGCAACAAAGTGTATGCACGTTTTTTTCTAGCAAATATTTTAGAGCGACTCGGTTCTA
TGATTGCTGGAGTTTCTTTA

Downstream 100 bases:

>100_bases
TATATTTAGTTTTTTATTTCTGAATATTCTATCGAATAGTAAGGGGAAATCGTTATGTTGATGCGAATGGTTAAGTGGTG
TGGGATTACTGGTTTACAAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGILISLYYGMIILVFLFLFLEN
ACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIATMVYWTFGIYGSILVNTLTFIMSGILIQTISIPEK
VRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFGLLNGILSVSTTYILKYKLAPATYESLAMVGGVVG
GISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPFINVAIMGWMYEIVEESFMGR
VQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTCLYQAILPSGQKRVHVVAKEM

Sequences:

>Translated_386_residues
MFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGILISLYYGMIILVFLFLFLEN
ACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIATMVYWTFGIYGSILVNTLTFIMSGILIQTISIPEK
VRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFGLLNGILSVSTTYILKYKLAPATYESLAMVGGVVG
GISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPFINVAIMGWMYEIVEESFMGR
VQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTCLYQAILPSGQKRVHVVAKEM
>Mature_386_residues
MFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGILISLYYGMIILVFLFLFLEN
ACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIATMVYWTFGIYGSILVNTLTFIMSGILIQTISIPEK
VRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFGLLNGILSVSTTYILKYKLAPATYESLAMVGGVVG
GISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPFINVAIMGWMYEIVEESFMGR
VQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTCLYQAILPSGQKRVHVVAKEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43105; Mature: 43105

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGI
CEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLYYGMIILVFLFLFLENACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GVGIATMVYWTFGIYGSILVNTLTFIMSGILIQTISIPEKVRLPNGRTKWKEVNLKMLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
EFKEGIRYIYQNETLKKLLLGFIVFGLLNGILSVSTTYILKYKLAPATYESLAMVGGVVG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
GISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVAIMGWMYEIVEESFMGRVQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVTCLYQAILPSGQKRVHVVAKEM
HHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGI
CEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLYYGMIILVFLFLFLENACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GVGIATMVYWTFGIYGSILVNTLTFIMSGILIQTISIPEKVRLPNGRTKWKEVNLKMLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
EFKEGIRYIYQNETLKKLLLGFIVFGLLNGILSVSTTYILKYKLAPATYESLAMVGGVVG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
GISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVAIMGWMYEIVEESFMGRVQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVTCLYQAILPSGQKRVHVVAKEM
HHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]