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The map label for this gene is gerPF [H]

Identifier: 49185191

GI number: 49185191

Start: 2175446

End: 2175685

Strand: Reverse

Name: gerPF [H]

Synonym: BAS2182

Alternate gene names: 49185191

Gene position: 2175685-2175446 (Counterclockwise)

Preceding gene: 49185203

Following gene: 49185186

Centisome position: 41.61

GC content: 38.75

Gene sequence:

>240_bases
ATGATTGTAAAGTGGGTGAAAACCATGCCCTCAGTTGTAGGGAATTTAGTTGTACAAAATAGTAACGGTTCATTTAACTT
AGGTGATTTCTACAACGTTTCTCCGAAAGAAAATACGAAAGCTTATAATGGATCTGGCGCTTCAAACGTCGGTTTTGTTG
TTAATACTTTTAATGGCGTGAGTGCGACTAATACGTTTGATTCTGACCTTGCGGATCAAAACCAAGTCGGTACAGCCTAA

Upstream 100 bases:

>100_bases
TTTTATTATGGGATTAAACTACACTTCAAACGTTTTACTATTTCGCAATTTTTATTATATGAACCATTTGGACTATAAGA
CCATATAGTATTGTTAACAA

Downstream 100 bases:

>100_bases
CCCTATTTTTTCATCTTACTGTTTAAGAATTTCAAATTTGTCCATACTATAATCAGGCTGTTACACAGCTATTATTGATT
TTTGGAGTACCCTATCTTTT

Product: spore germination protein GerPF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MIVKWVKTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA

Sequences:

>Translated_79_residues
MIVKWVKTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA
>Mature_79_residues
MIVKWVKTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 8336; Mature: 8336

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKWVKTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGV
CCCHHHHHHHHHHCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCC
SATNTFDSDLADQNQVGTA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVKWVKTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGV
CCCHHHHHHHHHHCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCC
SATNTFDSDLADQNQVGTA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]