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The map label for this gene is yngC [H]

Identifier: 49184913

GI number: 49184913

Start: 1920900

End: 1921502

Strand: Direct

Name: yngC [H]

Synonym: BAS1901

Alternate gene names: 49184913

Gene position: 1920900-1921502 (Clockwise)

Preceding gene: 49184912

Following gene: 49184914

Centisome position: 36.74

GC content: 35.32

Gene sequence:

>603_bases
ATGTTAGCAAGCATAATAGATCAGTTATTGCAATTTTTTGCAAGTTTAGGTTACTTTGGAGTAGCGCTAGCTTTAATGAT
TGAAATTATCCCGAGTGAAATTGTACTTTCGTATGCTGGATTTTTAGTCGCAGATGGTAAAATTAGCTTTGTCGGTGCAG
TTATTGCTGGAACAATTGGTGGTACTTTAGCCCAAATCTTTTTATATTGGCTTGGATACTATGGTGGACGTCCAGTTGTA
GAGAAATACGGGAAATATTTACTTATTAATAAACACCATTTAGACATAGCAGAAAATTGGTTTAAGCGTTACGGAGCAGG
AGTAATCTTTTCGGCGCGTTTTATCCCAGTCGTACGTCATGCAATTTCTATTCCAGCAGGATTAGCTAAAATGCCGTTAA
AACTGTTTACACTGTATACAGTAGTTGCGATTATTCCATGGTCAATACTATTTATATATTTAGGTGAAAAGCTTGGTGGA
AATTGGCGACATATTAAAGAGTATGCATCTGATTACACACATTACATAATTATAGGAGCAGTTCTCTTTGTTGCTCTATA
CTTCGGTTTAAAGTATTTCAAAAAGAAAAAAGCAGCACGTTAA

Upstream 100 bases:

>100_bases
GCGTATGCCGGTGAGATTGTCGGCATGAAGATATTGGCAGAATACAACCTTTATGTAATAATGGGATGGTATGTGAAGAA
AAAAGGAGATAGAAAATAAA

Downstream 100 bases:

>100_bases
AGTCAATGATTTTTCATTGGCTTTTTTTATTTGTTTCGGTTCGGTTCTAAAAAAAAAGAGTTGTCCATAATGTATAATAA
TAAAGCGTAGCGGAGGAATG

Product: dedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLASIIDQLLQFFASLGYFGVALALMIEIIPSEIVLSYAGFLVADGKISFVGAVIAGTIGGTLAQIFLYWLGYYGGRPVV
EKYGKYLLINKHHLDIAENWFKRYGAGVIFSARFIPVVRHAISIPAGLAKMPLKLFTLYTVVAIIPWSILFIYLGEKLGG
NWRHIKEYASDYTHYIIIGAVLFVALYFGLKYFKKKKAAR

Sequences:

>Translated_200_residues
MLASIIDQLLQFFASLGYFGVALALMIEIIPSEIVLSYAGFLVADGKISFVGAVIAGTIGGTLAQIFLYWLGYYGGRPVV
EKYGKYLLINKHHLDIAENWFKRYGAGVIFSARFIPVVRHAISIPAGLAKMPLKLFTLYTVVAIIPWSILFIYLGEKLGG
NWRHIKEYASDYTHYIIIGAVLFVALYFGLKYFKKKKAAR
>Mature_200_residues
MLASIIDQLLQFFASLGYFGVALALMIEIIPSEIVLSYAGFLVADGKISFVGAVIAGTIGGTLAQIFLYWLGYYGGRPVV
EKYGKYLLINKHHLDIAENWFKRYGAGVIFSARFIPVVRHAISIPAGLAKMPLKLFTLYTVVAIIPWSILFIYLGEKLGG
NWRHIKEYASDYTHYIIIGAVLFVALYFGLKYFKKKKAAR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22369; Mature: 22369

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASIIDQLLQFFASLGYFGVALALMIEIIPSEIVLSYAGFLVADGKISFVGAVIAGTIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTLAQIFLYWLGYYGGRPVVEKYGKYLLINKHHLDIAENWFKRYGAGVIFSARFIPVVRH
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
AISIPAGLAKMPLKLFTLYTVVAIIPWSILFIYLGEKLGGNWRHIKEYASDYTHYIIIGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLFVALYFGLKYFKKKKAAR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLASIIDQLLQFFASLGYFGVALALMIEIIPSEIVLSYAGFLVADGKISFVGAVIAGTIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTLAQIFLYWLGYYGGRPVVEKYGKYLLINKHHLDIAENWFKRYGAGVIFSARFIPVVRH
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
AISIPAGLAKMPLKLFTLYTVVAIIPWSILFIYLGEKLGGNWRHIKEYASDYTHYIIIGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLFVALYFGLKYFKKKKAAR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]