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The map label for this gene is tsr [C]

Identifier: 49184879

GI number: 49184879

Start: 1889429

End: 1891411

Strand: Direct

Name: tsr [C]

Synonym: BAS1867

Alternate gene names: 49184879

Gene position: 1889429-1891411 (Clockwise)

Preceding gene: 49184878

Following gene: 49184880

Centisome position: 36.14

GC content: 34.95

Gene sequence:

>1983_bases
ATGGGTAGACTATTAAATTCGTTTCGTGATATGAAAGTAGCAAAAAAACTACTAATTTCATTTTTCGTCATTTTAATTGC
GGCTGTCTCTATTATCGGAGGCATGTCTTATCAAACAGCTAAAAAGAATTTTGAATCACAAATTACGAGTAGTGCTCACG
ACAATATAAAAATATTAGATAATTTAATTAATCAAATGATTGAGGCAAAATTTAATGATGTAAATAATTTTGCACGGGTG
ATTCAAGGTAATATGTATCAAGGGGATAATCAAGATGAATTAAGAAAAATGTTATCTCAATATATCAACTTGAATAAAGA
TGTTGAACAAGTATATGTTGCTGGAAATGATAAAAAATTTGTACAAGAACCAAATATACAAATGGCGGCAGACTATGATC
CAACAGAACGTTCTTGGTATAAAGATGCAGTAGCAAAACAAGGTGGTATTGTAATTACTGAGCCGTATAAAGCAAAGGGA
AATGGACATATTGTCGTAACGATTGCAAAACAAACAGAAGATAAAAACGGTGTTGTAGCGATAGATTTAAGTTTAGATAA
CCTATTAAAAACAACAAAGTTAATCAATATTGGTAAAAAAGGATATGCTTTCATTTTAGATGGGAAACAAAAAATAATTG
CACATCCTCAAGAGAAGTCAGGAGAAAAAGCAGCTGATTCTTGGGCGAAGAAAATTTATGAAGATAATCATGGTGCTTTT
TCATATACGTATGACGGTAGCGAAAAGCAAATGGTATTTGCTACAAATGTAAAAACGGGTTGGAAAATTGGCGGGACGAT
GTACTCAAATGAAGTAATTGAAGCTGCACAGCCTGTATTTTATAATATGTTAATTGTTATGTTCATTTCATTAGTTATAG
GCGGGGCTCTTATTTATTTCGTGACACTTTCTATTACGAAGCCATTAAAAAGATTAGTTGCCACTTCTAAAGAAATAAGT
GAGGGAGATTTAACGCAAACAATTGATATTCATTCTAATGATGAAATTGGTCAACTTGCAAAAGGATTTAATGAGATGAC
TGATGCGTTGCGAACGTTAATCGGAAGAATCAATACTTCGGCTGGACATGTTGCAGCAGCATCAGAAGAGCTCACGGCAA
GTGTAAGACAGGCGAGTGAAGCGACTGAGCAAATTACGATGGCAATGGATGAAATATCGAGCGGGGCAACAACGCAAACG
ACAAGTGTAGAAAATGGTGCAATGTTATTATTTGATGTAACAGAAGGAATTCAGCATGTAGCAAATAGTTCATCATCGAT
TAATACGGCTTCTGCTCATACTCGTGAAAAAGCAGAAGATGGTGGAAAACTAGTAGGAAAAACAGTAAACCAAATGCAGT
CTATTGCAGAATCTGTTTCACAATCGGATGAAGTTATACAGTTATTAAATAATAAATCAAAGCAAATTGGTGACATACTA
GAAGTCATTCAAAATATTGCAGATCAAACAAACCTTCTAGCTTTGAATGCAGCAATTGAAGCTGCAAGAGCAGGAGAGCA
TGGAAGAGGATTTGCAATTGTTGCAGATGAAGTACGTAAATTGGCTGAGAAGTCTAGCGTGTCTTCTAGTGAAATTAGTA
AATTAATATGTGAAATACAAGATGACATGAGTAAGACGGTAAAGTCTATGGGTCATGTAAATGAGGAAGTTCAATCTGGA
CTTGTTATTGCGAATGAAACGAAGCAAAACTTTACTGAGATTTTACAATCTACAAATGAAATTGCAGATCAAATTAAAAC
GATGGTTGAAACAGCTAACGGGATGTCAAAAGGTGCAAATGAAGTGTCTATTTCGGTTGGGCAAATTGCAATGACAGCGC
AGAATAATGCGACGAGTACTCAAAACGTTGCAGCATCAGCGGAAGAACAATTAGCTTCGATGGAGGAAATTGGTTCTGCA
GCTGGTACGCTTTCTCAAATGGCTGAAGAGTTACAAGTATTAATTGAAAGATTTAAAGTTTAA

Upstream 100 bases:

>100_bases
GTATTCATCATAATAGGTTATGAAAATAATAATTAGGGAATGGGAAATATTTATAGTTCACTAAATTTAACTTTTGAAAT
TGAAAAGCAGGAGGTTTGTA

Downstream 100 bases:

>100_bases
TAGAGAACAGACTACTCCAAAATAGCAGTATGCTATTGGAGTAGTCTGTTTTTTTTTTGTAAAATTAAATAGAAATGGAC
AATACTTTTATGAGGTTTAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MGRLLNSFRDMKVAKKLLISFFVILIAAVSIIGGMSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARV
IQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAGNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKG
NGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAF
SYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEAAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEIS
EGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIGRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQT
TSVENGAMLLFDVTEGIQHVANSSSSINTASAHTREKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDIL
EVIQNIADQTNLLALNAAIEAARAGEHGRGFAIVADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSG
LVIANETKQNFTEILQSTNEIADQIKTMVETANGMSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSA
AGTLSQMAEELQVLIERFKV

Sequences:

>Translated_660_residues
MGRLLNSFRDMKVAKKLLISFFVILIAAVSIIGGMSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARV
IQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAGNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKG
NGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAF
SYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEAAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEIS
EGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIGRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQT
TSVENGAMLLFDVTEGIQHVANSSSSINTASAHTREKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDIL
EVIQNIADQTNLLALNAAIEAARAGEHGRGFAIVADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSG
LVIANETKQNFTEILQSTNEIADQIKTMVETANGMSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSA
AGTLSQMAEELQVLIERFKV
>Mature_659_residues
GRLLNSFRDMKVAKKLLISFFVILIAAVSIIGGMSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVI
QGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAGNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGN
GHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAFS
YTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEAAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISE
GDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIGRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTT
SVENGAMLLFDVTEGIQHVANSSSSINTASAHTREKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDILE
VIQNIADQTNLLALNAAIEAARAGEHGRGFAIVADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGL
VIANETKQNFTEILQSTNEIADQIKTMVETANGMSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAA
GTLSQMAEELQVLIERFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=331, Percent_Identity=29.9093655589124, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=30.625, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=29.4765840220386, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=29.6495956873315, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789453, Length=333, Percent_Identity=27.9279279279279, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71732; Mature: 71601

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLLNSFRDMKVAKKLLISFFVILIAAVSIIGGMSYQTAKKNFESQITSSAHDNIKILD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
NLINQMIEAKFNDVNNFARVIQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAGNDKKF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCCHHH
VQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGNGHIVVTIAKQTEDKNGVVA
HCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCEEE
IDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAF
EEECHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEE
SYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEAAQPVFYNMLIVMFISLVIGGALIYF
EEEECCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLSITKPLKRLVATSKEISEGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIGRINTS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
AGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTTSVENGAMLLFDVTEGIQHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEHHHHHHHH
ANSSSSINTASAHTREKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDIL
HCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVIQNIADQTNLLALNAAIEAARAGEHGRGFAIVADEVRKLAEKSSVSSSEISKLICEIQ
HHHHHHHCCHHEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
DDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEILQSTNEIADQIKTMVETANGMSKGAN
HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
EVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAAGTLSQMAEELQVLIERFKV
CEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRLLNSFRDMKVAKKLLISFFVILIAAVSIIGGMSYQTAKKNFESQITSSAHDNIKILD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
NLINQMIEAKFNDVNNFARVIQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAGNDKKF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCCHHH
VQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGNGHIVVTIAKQTEDKNGVVA
HCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCEEE
IDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAF
EEECHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEE
SYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEAAQPVFYNMLIVMFISLVIGGALIYF
EEEECCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLSITKPLKRLVATSKEISEGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIGRINTS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
AGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTTSVENGAMLLFDVTEGIQHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEHHHHHHHH
ANSSSSINTASAHTREKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDIL
HCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVIQNIADQTNLLALNAAIEAARAGEHGRGFAIVADEVRKLAEKSSVSSSEISKLICEIQ
HHHHHHHCCHHEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
DDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEILQSTNEIADQIKTMVETANGMSKGAN
HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
EVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAAGTLSQMAEELQVLIERFKV
CEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA