Click here to switch to the map view.

The map label for this gene is puuR [H]

Identifier: 49184664

GI number: 49184664

Start: 1665269

End: 1665814

Strand: Reverse

Name: puuR [H]

Synonym: BAS1650

Alternate gene names: 49184664

Gene position: 1665814-1665269 (Counterclockwise)

Preceding gene: 49184669

Following gene: 49184657

Centisome position: 31.86

GC content: 31.32

Gene sequence:

>546_bases
ATGGAAAATATAGATATTGGTAAAAAAATTGAACAACAAAGAAAAGAAAAAGGTTTAACGAGTAAAGAACTTGCAAAGAT
GGCTGATATTACACCATCTATGTTAAGTCAAATTGAGCGTGGATCTGCTAACCCTTCTATCCAAACATTAAAAGTACTCG
CTAAAGCTCTTGATGTTCCAACATTTAGCTTTTTACTTGAAGATACCAATACAGACGATTTAATTGTACGTTCTCATAAA
CGCAAAAAAATGATTATCGATAATTTATCATATGAAATGCTATCACCTGATTTCACAGGAAATTTAGCAACAGCAATTAT
GACCATCCCGCCGAATACAGCTTCATCAGAAAATGTACTAGAACATAAAGGTGAAGAATTAGCATTTGTATTAGAAGGGA
AAATCACATTACATTTAAATGAAGAAGAATACATATTAGAAACGGGTGATAGCGTAAAAATACCCGCTTATTTAAAACAT
AAATGGGTAAATCAATTCGAGAAAAATGTCATTGTTTTATTTTCTGTTACTCCGCCGATTTTTTAA

Upstream 100 bases:

>100_bases
AAATTAATTTTAATATAGTTTAACATAAATTATCCACTTTAGTTAATTTTAATTTAACTTATTTAAATATAATTTAATAA
TCAGTAAGGAGATTTTCAAT

Downstream 100 bases:

>100_bases
TAGATGTAATAAAAATAGCCACGTGCGGATTCCTCCGTACATGGCTATTTTTATCTTTTCGGCACGAACAAAATCCCTAA
ACTCATAATACAAAAACTGA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MENIDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDVPTFSFLLEDTNTDDLIVRSHK
RKKMIIDNLSYEMLSPDFTGNLATAIMTIPPNTASSENVLEHKGEELAFVLEGKITLHLNEEEYILETGDSVKIPAYLKH
KWVNQFEKNVIVLFSVTPPIF

Sequences:

>Translated_181_residues
MENIDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDVPTFSFLLEDTNTDDLIVRSHK
RKKMIIDNLSYEMLSPDFTGNLATAIMTIPPNTASSENVLEHKGEELAFVLEGKITLHLNEEEYILETGDSVKIPAYLKH
KWVNQFEKNVIVLFSVTPPIF
>Mature_181_residues
MENIDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDVPTFSFLLEDTNTDDLIVRSHK
RKKMIIDNLSYEMLSPDFTGNLATAIMTIPPNTASSENVLEHKGEELAFVLEGKITLHLNEEEYILETGDSVKIPAYLKH
KWVNQFEKNVIVLFSVTPPIF

Specific function: Represses puuD [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=185, Percent_Identity=28.1081081081081, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20372; Mature: 20372

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDVP
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
TFSFLLEDTNTDDLIVRSHKRKKMIIDNLSYEMLSPDFTGNLATAIMTIPPNTASSENVL
CEEEEEECCCCCCEEEECCCCCHHHHHCCCHHHCCCCCCCCEEEEEEEECCCCCCCCHHH
EHKGEELAFVLEGKITLHLNEEEYILETGDSVKIPAYLKHKWVNQFEKNVIVLFSVTPPI
HHCCCEEEEEEECEEEEEECCCEEEEECCCCEECCHHHHHHHHHHHCCCEEEEEECCCCC
F
C
>Mature Secondary Structure
MENIDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDVP
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
TFSFLLEDTNTDDLIVRSHKRKKMIIDNLSYEMLSPDFTGNLATAIMTIPPNTASSENVL
CEEEEEECCCCCCEEEECCCCCHHHHHCCCHHHCCCCCCCCEEEEEEEECCCCCCCCHHH
EHKGEELAFVLEGKITLHLNEEEYILETGDSVKIPAYLKHKWVNQFEKNVIVLFSVTPPI
HHCCCEEEEEEECEEEEEECCCEEEEECCCCEECCHHHHHHHHHHHCCCEEEEEECCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]