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The map label for this gene is ygaJ [H]

Identifier: 49184657

GI number: 49184657

Start: 1660352

End: 1661050

Strand: Reverse

Name: ygaJ [H]

Synonym: BAS1643

Alternate gene names: 49184657

Gene position: 1661050-1660352 (Counterclockwise)

Preceding gene: 49184664

Following gene: 49184653

Centisome position: 31.77

GC content: 33.91

Gene sequence:

>699_bases
ATGAAATTAGCTGTCATTGGTGGCGGTGATTTACAAGATTCCAATCACTCGCCTATTAATGAGCGACTTATAGAATTAAC
AAATAAACAATATCCGAAAGTATTATTCATTCCTACAGCTAGTCATGATGATGAAAGCTATATAAAATTATTTTTAGACA
CATTTGAAAAACAATTACACTGTGACGTACAAATTTTACGTATTATAGCTGATACACCTTCTAAATATGAAATAGACGAA
ATGATTCAGTCTGCTGATTTAATTTATCTCGGTGGCGGGAACTATATTCAAATGGTTACAGAATGGAAAGAACATAAACT
CGATGAAAAATTACTATTGGCTCTGCAGCAAGGAACGCTCATTGCAGGATACAGCGCTGGTGCTATGTGCTGGTTCACAT
CTAGCATCCGCTCAGATTATGAAGGTTCCGGTTATATAGAGAGCAACGGCTGGGGAATTGTGAACAAAAGGTTTTGTCCA
CATTATAATCAATTAAATAGAATGAACGCCTTCCATTCCTTTTTACAAAATCATCAAGGTAATATAGAAGGCATTGCTCT
AGAGGATAATTGTGCCTTATATATTACAGAAGAATCTTTTGAAATTATCGGTGAACCAGAAAAAGCTTGGGAGTTTTATA
TGAGTGATAACAAACTCATTAGACAACATTTTGATATTACTTTAAAAAGCTATTTATAA

Upstream 100 bases:

>100_bases
TTTAAACTATATTTTCTACTTAATCATTACATCACAGAAGGAATGTAACTCTCTTCTATCGAATTTTTATATAACGAAAA
TGATTAGGTGGTGCTTTACT

Downstream 100 bases:

>100_bases
AGATACCTTTACAAAAAATGTCCCTAAGTAAAATAACTTAGGGACTTTTTCAATATTTAACTCACTAATCGTGTAATTCG
TTTCTTCTGCCATGAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILRIIADTPSKYEIDE
MIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL

Sequences:

>Translated_232_residues
MKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILRIIADTPSKYEIDE
MIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
>Mature_232_residues
MKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLHCDVQILRIIADTPSKYEIDE
MIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 26644; Mature: 26644

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLH
CEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
CDVQILRIIADTPSKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALQQGTL
CCHHEEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEEEHHHHHHCCCHHHHHHHHCCCE
IAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHSFLQNHQG
EEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
NIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
CEEEEEEECCEEEEEECCCEEECCCCHHHEEEEECCCHHHHHHHCEEEECCC
>Mature Secondary Structure
MKLAVIGGGDLQDSNHSPINERLIELTNKQYPKVLFIPTASHDDESYIKLFLDTFEKQLH
CEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
CDVQILRIIADTPSKYEIDEMIQSADLIYLGGGNYIQMVTEWKEHKLDEKLLLALQQGTL
CCHHEEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEEEHHHHHHCCCHHHHHHHHCCCE
IAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHSFLQNHQG
EEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
NIEGIALEDNCALYITEESFEIIGEPEKAWEFYMSDNKLIRQHFDITLKSYL
CEEEEEEECCEEEEEECCCEEECCCCHHHEEEEECCCHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]