Click here to switch to the map view.

The map label for this gene is yqjZ [H]

Identifier: 49184619

GI number: 49184619

Start: 1622962

End: 1623297

Strand: Reverse

Name: yqjZ [H]

Synonym: BAS1605

Alternate gene names: 49184619

Gene position: 1623297-1622962 (Counterclockwise)

Preceding gene: 49184620

Following gene: 49184618

Centisome position: 31.05

GC content: 35.42

Gene sequence:

>336_bases
ATGGCATCTAATTTAGAAAAAAACAATTCTTATTATGCAGTTATATTCACTTCCAATTTATCTAATGATACAGCTGATTA
TAGTACAGTTGCCGATAAAATGGAGGAACTCGCAAAGCAGCAACCTGGGTTTCTAGATGTAGAAAGTGTGCGAGATCATT
CAGGGCTCGGAATCACAATTTCTTATTGGGAATCACTTGAAGCAATTGAAAATTGGAAACAGAACGTCTTACATAAAGAA
GCGAAAAAAAGAGGTCGTGAGCAATGGTACGAAAACTTTCACCTACGTATCTGCCTTGTTGAGAAAGAATTTAAGTTTCA
TAGAAATACTTTGTAG

Upstream 100 bases:

>100_bases
TGAAAAAAAATAAGAATTTTCTACTTCTTTTCTTTTTGTGACCTGCTAAAATACAAACTATGGATTAATTATTCACACTA
TACATTAAGGGGGAAAAATA

Downstream 100 bases:

>100_bases
ATATGAAGAAAAAATTAGCTCTCATTGCTGTTCATGAAATATATGGTGTGAACGATCATATGCATCATGTCACCGACCAC
TTCACTTCATCTCATATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MASNLEKNNSYYAVIFTSNLSNDTADYSTVADKMEELAKQQPGFLDVESVRDHSGLGITISYWESLEAIENWKQNVLHKE
AKKRGREQWYENFHLRICLVEKEFKFHRNTL

Sequences:

>Translated_111_residues
MASNLEKNNSYYAVIFTSNLSNDTADYSTVADKMEELAKQQPGFLDVESVRDHSGLGITISYWESLEAIENWKQNVLHKE
AKKRGREQWYENFHLRICLVEKEFKFHRNTL
>Mature_110_residues
ASNLEKNNSYYAVIFTSNLSNDTADYSTVADKMEELAKQQPGFLDVESVRDHSGLGITISYWESLEAIENWKQNVLHKEA
KKRGREQWYENFHLRICLVEKEFKFHRNTL

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 13046; Mature: 12914

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNLEKNNSYYAVIFTSNLSNDTADYSTVADKMEELAKQQPGFLDVESVRDHSGLGITI
CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEE
SYWESLEAIENWKQNVLHKEAKKRGREQWYENFHLRICLVEKEFKFHRNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHCCCC
>Mature Secondary Structure 
ASNLEKNNSYYAVIFTSNLSNDTADYSTVADKMEELAKQQPGFLDVESVRDHSGLGITI
CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEE
SYWESLEAIENWKQNVLHKEAKKRGREQWYENFHLRICLVEKEFKFHRNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]