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The map label for this gene is ypjC [H]

Identifier: 49184457

GI number: 49184457

Start: 1464019

End: 1464900

Strand: Reverse

Name: ypjC [H]

Synonym: BAS1440

Alternate gene names: 49184457

Gene position: 1464900-1464019 (Counterclockwise)

Preceding gene: 49184465

Following gene: 49184427

Centisome position: 28.02

GC content: 34.01

Gene sequence:

>882_bases
ATGACATCAAATTTGAAGATTCGAAATATCATTTTTATTTTAATCGGTTCCGCTATTTTTTCTTTCGGTATTGTGAATAT
CAATATTGAAAATCACCTTGCAGAAGGTGGATTTACCGGTATTACACTATTATTGTATTTTCTATTTAAGTTTGATCCTT
CTTATTCAAACTTAATTTTAAATATCCCTATATTTTTCATTGGTTGGAAATTACTTGGAAGAACAACGTTTATCTATACA
CTAATCGGTACCTTTAGCGTATCTTTATTTCTATGGATTTTTCAGCGTTACGAAGTTCTCAACTTACATTTAAACTTACA
AAATGATATGACACTCGCAGCTTTATTTGCTGGGGCATTTATTGGTATCGGTCTCGGGATCATATTTAAATACGGCGGAA
CTACTGGCGGTGTAGATATTATTGCGAGACTCGCTCATAAATATGTTGGCTGGAGTATGGGGAAAACGATGTTTATGTTT
GATGCTATCGTCATTATCGTCTCTATCCTTACCTATTTATCATATCGCGAGGGTATGTATACGTTAGTTGCTGTTTTTAT
CGGGGCGAAGGTCATTGATTTTATGCAAGAAGGAGCCTATGCAGCAAAAGGAGCAACTATTATCTCAGATAAAAACGATG
AAATTGCTGCTAAAATTTTATCTGAGATGGAGCGCGGAGCAACCTTTTTAAAAGCTGTTGGATCATATACAAAAGTGGAA
CGGAACGTATTGTATTGCGTTGTTGCTAAAAATGAAATCGTGAAATTAAAAAATATTATTACTTCTGTAGATCCTCATGC
ATTTGTTGCAGTAAGTGACGTACATGATGTAGTTGGTGAAGGTTTTACGTTGGATGAAAATAAAAATCCATTACATACAT
AA

Upstream 100 bases:

>100_bases
ATAGCCTTCACTATTTTCACTAGCAACTAGAAATTACTTATCATTATGTTTTACCGTTTCAGCGGAGCAATGCCATTTAC
ATAATTAGGGGGATTTCTAT

Downstream 100 bases:

>100_bases
ACATAACTAGAAAAGCTTTTTAGCTTTTCTAGTTTTTTATTACATATTGCTTAAGTTTCTCTAAATCCTCATAAATAAGC
TCCAATAAGCTCCGATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYT
LIGTFSVSLFLWIFQRYEVLNLHLNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMF
DAIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE
RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT

Sequences:

>Translated_293_residues
MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYT
LIGTFSVSLFLWIFQRYEVLNLHLNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMF
DAIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE
RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT
>Mature_292_residues
TSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYTL
IGTFSVSLFLWIFQRYEVLNLHLNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFD
AIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVER
NVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 32491; Mature: 32359

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLIL
CCCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
NIPIFFIGWKLLGRTTFIYTLIGTFSVSLFLWIFQRYEVLNLHLNLQNDMTLAALFAGAF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH
IGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFDAIVIIVSILTYLSYREGMY
HHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
TLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE
HHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT
CCEEEEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure 
TSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLIL
CCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
NIPIFFIGWKLLGRTTFIYTLIGTFSVSLFLWIFQRYEVLNLHLNLQNDMTLAALFAGAF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH
IGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFDAIVIIVSILTYLSYREGMY
HHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
TLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE
HHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT
CCEEEEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]