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The map label for this gene is 49184383

Identifier: 49184383

GI number: 49184383

Start: 1395516

End: 1396457

Strand: Reverse

Name: 49184383

Synonym: BAS1366

Alternate gene names: NA

Gene position: 1396457-1395516 (Counterclockwise)

Preceding gene: 49184384

Following gene: 49184382

Centisome position: 26.71

GC content: 36.09

Gene sequence:

>942_bases
ATGACTATTGATTCTATGAAAGAAAGGAATGAAAAGATGAACAATAAAAATAAAGGAAAAGTATTTTATGGTAATGATTG
TTGCGAAGTAAGAGCTTGTAGTCATATTAACATCTCTAAGTCCGAACTTACAGAATTCGTTAGACTTCTTCAAGCTCTTG
GCCAAGCTATTCAAGCTGTCTTTCAGAACCCTTCTCAAACTAATATCAATAACTTGATAGCTGCGCTCAATAACTTACAA
AAGTTCCTCAATTGCTTAGATTTATCCCCAGCACAAAAACAAATTGGAAATTCTATCATTGCTAATTTATTAACTATTTT
AAGAACAACACCTTTCTCATGCGGAGCATTATACGTTGAGCTACAAAGCTTGCTTAATTATTTATTGTATATCGCTAAGT
TATTCAAAGTAGATTGTTGTACGATTGACAAACTAGTTAGACTCATAACAGAGATCCAAACTATTCTAGTTCAATACGGA
TCAGGTTGCCTTGGAGGCGGAGGCGCTACTGGTGCGCAAGGTGCTCAAGGACCAGCGGGTACACCAATTCCTGTAACGAT
TGCGGCAATCGGAAACTCCAATGCTCAAACAATATCCCCTGGAACAAACATCCAATTTAATCAAGTTTTCGAAATAAATA
ACATTAATTTTAATGACACTGCAGATACTTTAACAATTTTAGAAACAGGCGTATATGATATTAGTTTCTCAGCGTCTACA
ACTTTCCCAGGATCTTCACCATTTGGATTCGGTATTTCATTCAATGGTCAACCACCTACTCGTAATTTCTCAACTAACGT
TATCGGTAGTGCTGTATCGTTCTCTACAATCGTTACTTTAGAAGCTGGTACAACAATTTCTGTACAACCTACAGCAAACA
CTATTTCTATTCCTAACACAGGCGATACAACAGCAACACTATCTGTATTCCGAATTTACTAA

Upstream 100 bases:

>100_bases
CCTTACTTACTTTTTGCTAAGTGGGACAATTTCTTATTTTTTTAGAAATGGTAGTTTGTCCATTACGAATTCAGTATAAA
TTTCATTTTAATATATAGTA

Downstream 100 bases:

>100_bases
TTTTCGCTTAAAAAGTATATTTATAATAATATGTATCGTTTAACCGTGCATTAAATCTCTCTTTATATAGAAAGGAGCAC
TTATTTGGGAGGATAAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Protein; Group-Specific Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Collagen-Like Protein

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTIDSMKERNEKMNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQ
KFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYG
SGCLGGGGATGAQGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSAST
TFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY

Sequences:

>Translated_313_residues
MTIDSMKERNEKMNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQ
KFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYG
SGCLGGGGATGAQGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSAST
TFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY
>Mature_312_residues
TIDSMKERNEKMNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQK
FLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGS
GCLGGGGATGAQGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTT
FPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33462; Mature: 33331

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDSMKERNEKMNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAV
CCCCHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FQNPSQTNINNLIAALNNLQKFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVE
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGAQGAQGPAG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSAST
CCCCEEEEEECCCCCCEECCCCCEEEEEEEEECCCCCCCCHHHHHHEECCCEEEEECCCC
TFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNT
CCCCCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEECCCCEEECCCC
GDTTATLSVFRIY
CCCCEEEEEEEEC
>Mature Secondary Structure 
TIDSMKERNEKMNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAV
CCCHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FQNPSQTNINNLIAALNNLQKFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVE
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGAQGAQGPAG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSAST
CCCCEEEEEECCCCCCEECCCCCEEEEEEEEECCCCCCCCHHHHHHEECCCEEEEECCCC
TFPGSSPFGFGISFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNT
CCCCCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEECCCCEEECCCC
GDTTATLSVFRIY
CCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA