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The map label for this gene is yhjP [H]

Identifier: 49183823

GI number: 49183823

Start: 846009

End: 847748

Strand: Reverse

Name: yhjP [H]

Synonym: BAS0799

Alternate gene names: 49183823

Gene position: 847748-846009 (Counterclockwise)

Preceding gene: 49183825

Following gene: 49183820

Centisome position: 16.21

GC content: 34.71

Gene sequence:

>1740_bases
ATGAAAATTATGGACTATTACATTAGACTAAGACTACATGCACAAGATCAACAACATATACGAAATAGCTTACAAGAATT
AGCGGATGTTTTATATTGCAGTACGAAAAACGTAAAGATTTTATTAAAGAAAATGAGCGAGGAGCAATTAATTAGCTGGA
CTCCAGGACGAGGACGCGGAAATAAAACGGAAATTCTATTTTCACATAATTTCGTAGAAGCGATTGAATCCTATACAGAT
GAACTGTTAGCGCAAGAAAAATTAAAGGACGTTTTTCTTCTTTTAAAAGAACCTCTCCCCCCTGCACTTCAAAAAAAGAT
AGAAAATAAACTACATCATCATTTTGGATACGAACCTTCAAATGATATGTACGACATATTAAAGATTCCTATATCGAGAA
AGATATTCCCATTAGATCCGGCTTTTGTCGCTGTAACTACAGAAAGCCATCTTACGAGTCAAATTTTTGATACGTTAGTC
GTTTATAACGATGTTACGGAAAAAATGGAACCACACATTGCGCATACGTGGGAATTAAGTGAAGACTGGCTTACGTGGAC
GTTCTATTTACGAAAGGATATTCATTTTCATAACGAAACAATTTTAACTTCTAAAGATGTGCAATTTTCATTTGAAAGGC
TAAAAGAAGTTCATTCCCCTTTCGAATGGTTAACAGAAGAAATTGTTCAAATTGAAACACCATCGCCACTGCAAATAAGG
TTCCATTTAGCAAAACCCAACCTTTTTTCCTTACACTATGTAAGTTCCATACAACTAGCAATTTTACCGCGTGATGTGAG
TATCGAAAATCATCATTATATAGGTACGGGACCTTTCAAACTTGCTCATTACTCTGAAGATAATATCGTACTCGAAGCAT
TCACTCATTATTTTAAAGAGCGCGCATTATTAGACCGTATTGAATTTTGGGGTATTCCGGATCATGTACAAATCGATGCT
GATTATGAACTACCAAATGAAGAGGAAAATGAAAGGCATGATATACAAATAGAAGAAATAGGTTGTATTTATGCTGGCTT
CAACTTTACAAAACCTGGTCCTCATCACGACATGTACTTTCGAAAAGCTTGGAGAGAACTATATGACGTTGAAACGATAC
TTCGTAGCATAGAAGGAAGACGAACAATTGCTGCATCAAGCTTTTTCCCTGAAAGAAGCCGCCAAGCTTTTAAAAGGTCT
TACTCTTTAGAAAAAGCGAAAAAGTATTTAAAAAAGAGCACTTATAATGGAGAGGCGATACATATTTACTTCTTCGCATT
TAAAGATAGTGCAAATGATGCATATTTCCTAAAAGAACGATGTGACGGTCTAGGTATACAAGTAGAGCTTCACCCATTTC
TCGTTTCAGATTATATGAACCGTTCTATCGATCAACATGCCGATATTATTTTCATGGGAGAAGTGTTTGCTTCCAATCAC
GAACTTGCATTCTTAAATGTATTTAAAAATAAAAGTTGCTTCGTAAACCGGTTCATGGACCAGCACTATGAAAAACAAAT
TAACTGTTTGTTAGATACATTTTTATTAGAAGAAAATAAAGAGAAACGCTATGAGCTCATGTATGAGATCGAAGAATTTT
TACAAGCAGAACACATCATTTTATTTAACTATCACGTTTTAAAAAGAAAGACATACCCTTCTTCTTTGAAAAACGTAACA
ATTGATTCATTCGGTTGGGCAAATTTTGCGAAGTTATGGATACAGCCATCCATGTCTTAA

Upstream 100 bases:

>100_bases
CCCCCTCCTTATGCTTACTTATTTTACTTTGAAAAAAAGGAAGAAAAGGGTTAGAATATTCTAAAGAGTTTCCCCTTTTA
TAATAGAAGGAAGTGTATAT

Downstream 100 bases:

>100_bases
AATGCGATTCATTATAAAAGGAGAAGGTACTACATCCTTAGTAGTACCTTCTTCACATACAAATATAAACTATTATTTAA
TTACTTCATCTAAGTGATCT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKIMDYYIRLRLHAQDQQHIRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
VYNDVTEKMEPHIAHTWELSEDWLTWTFYLRKDIHFHNETILTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFSLHYVSSIQLAILPRDVSIENHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDMYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQAFKRS
YSLEKAKKYLKKSTYNGEAIHIYFFAFKDSANDAYFLKERCDGLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFASNH
ELAFLNVFKNKSCFVNRFMDQHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS

Sequences:

>Translated_579_residues
MKIMDYYIRLRLHAQDQQHIRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
VYNDVTEKMEPHIAHTWELSEDWLTWTFYLRKDIHFHNETILTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFSLHYVSSIQLAILPRDVSIENHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDMYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQAFKRS
YSLEKAKKYLKKSTYNGEAIHIYFFAFKDSANDAYFLKERCDGLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFASNH
ELAFLNVFKNKSCFVNRFMDQHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS
>Mature_579_residues
MKIMDYYIRLRLHAQDQQHIRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFSHNFVEAIESYTD
ELLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLV
VYNDVTEKMEPHIAHTWELSEDWLTWTFYLRKDIHFHNETILTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
FHLAKPNLFSLHYVSSIQLAILPRDVSIENHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDMYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQAFKRS
YSLEKAKKYLKKSTYNGEAIHIYFFAFKDSANDAYFLKERCDGLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFASNH
ELAFLNVFKNKSCFVNRFMDQHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYPSSLKNVT
IDSFGWANFAKLWIQPSMS

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=331, Percent_Identity=26.8882175226586, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786650, Length=570, Percent_Identity=22.8070175438596, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789966, Length=390, Percent_Identity=22.3076923076923, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68598; Mature: 68598

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMDYYIRLRLHAQDQQHIRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFSHNFVEAIESYTDELLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVVYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
EDWLTWTFYLRKDIHFHNETILTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
CCCEEEEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCEEEE
FHLAKPNLFSLHYVSSIQLAILPRDVSIENHHYIGTGPFKLAHYSEDNIVLEAFTHYFKE
EEECCCCEEEEEEECEEEEEEEECCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHH
RALLDRIEFWGIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDMYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQAFKRSYSLEKAKKYLKKSTYNGEAI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCDGLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFASNH
EEEEEEEECCCCCEEEHHHHCCCCCEEEEECHHHHHHHHHCCHHHCCCEEEEEHHHCCCC
ELAFLNVFKNKSCFVNRFMDQHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHII
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
LFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSMS
EEEEEEEECCCCCCHHCCCEECCCCCCCEEHEEEECCCC
>Mature Secondary Structure
MKIMDYYIRLRLHAQDQQHIRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFSHNFVEAIESYTDELLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVVYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
EDWLTWTFYLRKDIHFHNETILTSKDVQFSFERLKEVHSPFEWLTEEIVQIETPSPLQIR
CCCEEEEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCEEEE
FHLAKPNLFSLHYVSSIQLAILPRDVSIENHHYIGTGPFKLAHYSEDNIVLEAFTHYFKE
EEECCCCEEEEEEECEEEEEEEECCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHH
RALLDRIEFWGIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDMYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQAFKRSYSLEKAKKYLKKSTYNGEAI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCDGLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFASNH
EEEEEEEECCCCCEEEHHHHCCCCCEEEEECHHHHHHHHHCCHHHCCCEEEEEHHHCCCC
ELAFLNVFKNKSCFVNRFMDQHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHII
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
LFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSMS
EEEEEEEECCCCCCHHCCCEECCCCCCCEEHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]