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The map label for this gene is yfkR [H]

Identifier: 49183750

GI number: 49183750

Start: 782498

End: 783493

Strand: Reverse

Name: yfkR [H]

Synonym: BAS0726

Alternate gene names: 49183750

Gene position: 783493-782498 (Counterclockwise)

Preceding gene: 49183751

Following gene: 49183749

Centisome position: 14.98

GC content: 33.84

Gene sequence:

>996_bases
ATGATTCACGTAGGTGGATTCGATATAACAAAAAACAAAAAATTTCGCGGAACAATTTTATATCCGGATTACACAAAAGG
CGTACAATCTAAACCAGAAACTCAATCCACTCATGCAGGTACAATTGAAACAATCTCTTCCCTTCTAAACGCCAAATCTC
CACATACGATTGCTGTAGGTCAAATGCGTGTTGTCCTATTTGGAAAAGCATTTGGCGAACATGGACTCGGGGATGTTATT
AACAACTTACAACGTGATCCTAACATTGGCCGTGATGTACAACTAGCACTTGTAGATGGTTCATCAGAAGAATTACTGAA
ACATGTGAGAACAAATGGATCTCTATATCTATCTGAATTACTGGAACAAAATATAAAAACCGAGACAATCCCTCGGACAG
CTTTAAATATTTTTTTATATAACTTCTATTCATCTGGATGTGATCCATTTCTTCCTTACATTCAAGTATCAGAAGACAAA
TCTGCTTCTATTAAAGGGCTCGCTTTTTTAAAAAAAGATAAAGTCGCTATGTATACGGATAGGAAAAGGTCTTTTTTATT
TAAATTACTCATTAATCCAACGAAAAATGGACGTTACGAAGTTCCGATACGTCAAGGTAAACATAAAGGAGTAATTGCTA
CTCAAAACTTATCTGGAAATAGTGTATGCTCTCTTTCGTCAAACGGTGATATTCCGAAAGTTAACATACACTTAAAGTTA
AATGGACTTGTAAAAAATGCCCCTAGTTGGCTTGATTTATCAAAGGGTAAAAATGTAACTTACGTAAAAAGACATATAGA
AAAAATGCTTGAAAAGGATTTAAACGAATTAATAAAACAATTCCAAGAAAATAAAATCGATCCAATAGGAATACGTGAAG
AAATTCGTAGTCATTCAAGAAAATGGAGCATGAAACAAATTCAAGATATGTATCCTAACGTAGACATTGCTGTTAATGTA
AAAATTAATGTCGTACAATCTGGTATCGGCGAATAG

Upstream 100 bases:

>100_bases
ACGGTGAGGAAAAATAAAAAATATTTTTTTATGCTTTTTCATTATCATTTTAATTTTCCAATCTGGTTGTACAGAAGCTC
ATATAGTTGATACACAGCGA

Downstream 100 bases:

>100_bases
TGAGGTGCTATCATGGCTGGACAAGATAAAACACATACTGTTTCCCCTTATTTCACATTCCTTCTATTACACTCCCTTCA
AATTGGAGTAGGAGTGTTGG

Product: spore germination protein GerYC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIHVGGFDITKNKKFRGTILYPDYTKGVQSKPETQSTHAGTIETISSLLNAKSPHTIAVGQMRVVLFGKAFGEHGLGDVI
NNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDK
SASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKL
NGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRKWSMKQIQDMYPNVDIAVNV
KINVVQSGIGE

Sequences:

>Translated_331_residues
MIHVGGFDITKNKKFRGTILYPDYTKGVQSKPETQSTHAGTIETISSLLNAKSPHTIAVGQMRVVLFGKAFGEHGLGDVI
NNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDK
SASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKL
NGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRKWSMKQIQDMYPNVDIAVNV
KINVVQSGIGE
>Mature_331_residues
MIHVGGFDITKNKKFRGTILYPDYTKGVQSKPETQSTHAGTIETISSLLNAKSPHTIAVGQMRVVLFGKAFGEHGLGDVI
NNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDK
SASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKL
NGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRKWSMKQIQDMYPNVDIAVNV
KINVVQSGIGE

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 37105; Mature: 37105

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHVGGFDITKNKKFRGTILYPDYTKGVQSKPETQSTHAGTIETISSLLNAKSPHTIAVG
CEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEC
QMRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSEL
CEEEEEEECHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHH
LEQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTD
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEEC
RKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKL
HHHHEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEE
NGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSR
CCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KWSMKQIQDMYPNVDIAVNVKINVVQSGIGE
CCCHHHHHHHCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MIHVGGFDITKNKKFRGTILYPDYTKGVQSKPETQSTHAGTIETISSLLNAKSPHTIAVG
CEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEC
QMRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSEL
CEEEEEEECHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHH
LEQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTD
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEEC
RKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKL
HHHHEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEE
NGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSR
CCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KWSMKQIQDMYPNVDIAVNVKINVVQSGIGE
CCCHHHHHHHCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]