Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 49183714

GI number: 49183714

Start: 750564

End: 751724

Strand: Reverse

Name: yebA [C]

Synonym: BAS0690

Alternate gene names: 49183714

Gene position: 751724-750564 (Counterclockwise)

Preceding gene: 49183726

Following gene: 49183713

Centisome position: 14.38

GC content: 36.43

Gene sequence:

>1161_bases
ATGAATATGAAAGCTACTGCTTTAACAGCAACTACTGTCGCAATTGCTTCTTTACTTCCTTCTATGGGAGAAACAAATGT
ACAAACAGCCAACGCTGAACAATTATCTAATGTGAAAACTGGATATGTCAAAGTCCATCAAGTAGCCTTACATACAAAAG
ATAACGCAAATAGCTCATCAATTGATACAATTCGCTTTAATACGAAAGTGAATATACTTGAAACAACTAATGGCTGGTAT
AAAGTATCTGTTAATAATAAAGTAGGTTACGTACAAAAAGATTCTATCCTACTAAAAAACAAACTTCAATCTAATAATCA
ATATATCGTCAATGCCAATGCATTAAACGTTCGTTCTGAACCTAATTTAGAATCTTCAATTTTAGATGTATTACCAAATG
GGAAATTCGTTACCATTCAAGAAGAACAAGGCGAGTGGTATAAAATTTTACATAATGGCAAAGCAGGTTACGTACAAAAA
GCATTCGTATCCAATGATTCACAGCCTTTAGTAAAAGGCATCACAGTACAAAATAATACGAAATACACAGTTGCAACACC
TAAACTTAACGTACGTAGCAACGCTAGTACAAGTAGCGCACTACTTGGTTCATTACAAAATGGTACACAATTACAAGTAG
TGGAAACTGTAGGAACTTGGTATAAAATTCGTTTTGGCACAGGATACGGATATGTGGCAAAGCATTATGTGGTGCAAAAT
CAAACGCAATCACAAACTCAAACAGCTCAACCTACTTCCATTCCAGCAGTTTTCAAATTCCCTACTCAAGGAAGAATTAG
CTCAACCTTTGATATGCGCTGGGAACAAATGCATTATGGTATAGATATCGCAGCTCAGGGTAATGTCTCTATCCAGGCAG
CGGCTGCAGGTAAAGTCGTGAAATCATATTATTCAGCTAGCTATGGCAATGTTGTGTTCATCGCCCATCAAATAAACGGG
AAATTATATACAACAGTCTATGCTCACATGAAAGATCGCACTGTACAAGCTGGTGATCAAGTACAAGCTGGACAATTAGT
AGGTCATATGGGAAACACAGGTCATTCATACGGGCAACATCTTCATTTTGAATTGCACAATGGAGAATGGAATTTTGAAA
AGACAAATGCAGTAAACCCACTGCCATATTTAGTTAGGTAA

Upstream 100 bases:

>100_bases
ATATTGATTTCATATTACATTTATGTGAATACACCCACTATATTATATCTTTATACTATAATAAAATTACAACTATACAA
CTAGAGGAGGTCTCTATTAT

Downstream 100 bases:

>100_bases
ATTGTATGCCACGCAATATACCTCTCTTAATTGAATACTTAGCCTTTTTAGGCTTAATCTGTTGTTTAATCATTTACAAT
ACAAATACTTTATTTTTATC

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQK
AFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Sequences:

>Translated_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQK
AFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR
>Mature_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQK
AFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=133, Percent_Identity=36.0902255639098, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789099, Length=128, Percent_Identity=36.71875, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 42483; Mature: 42483

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFVSNDSQPLVKGITVQNNT
CCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEECC
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVV
CCCCHHCCCCCCCCCEEEECCCCCCCCCCHHCCEEEHCCCEEEEECCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC
>Mature Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFVSNDSQPLVKGITVQNNT
CCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEECC
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVV
CCCCHHCCCCCCCCCEEEECCCCCCCCCCHHCCEEEHCCCEEEEECCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]