Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 49183675

GI number: 49183675

Start: 702085

End: 703029

Strand: Reverse

Name: mcp4 [H]

Synonym: BAS0650

Alternate gene names: 49183675

Gene position: 703029-702085 (Counterclockwise)

Preceding gene: 49183680

Following gene: 49183674

Centisome position: 13.45

GC content: 31.53

Gene sequence:

>945_bases
ATGTTTACTCAAAAGAAATCACTCCAACATAAAATTGATCAATTAGAAAATCGTATCCAGGAACTTAAAGCAGAATTAAA
ACAAAAAGATATCGAACAACAAGAGACCATTTCTTCTATCCACGATCGTGTACAAAATATTGTGCAAGAACATAAACTTG
TAAATAATCAACACCATACACTTCAAAATTTAGTTCAACAATTAAACTCATGTTTCGAAAATGTTTCAACGCGTACGACA
CATTCCAATGAATTAAATAATGAAATGTTACAAAAAGAACAAAGCTTAATTCAATCTATTGAAGAAATCATTGACTGCTC
TAATGAAGGAAAAGAATCTGTTCACCGTTTACTTATTGTAATTAACAAATTAGGTGAACAATCACAGCGCACGTCTAATA
GTATGAATCATTTAAGCGAACGCTCAAAAGAAATTGAGCAAATTGTAGAAGTCATTCAAAACATTGCAGCACAAACAAAT
TTACTTGCTTTAAATGCGAGTATTGAAGCTGCGCGTGCTGGAGAGCACGGTAAAGGATTCGCTGTCGTTGCCAATGAAGT
AAGAAAACTAGCAGAAAGTACAGCGGAAAGCACAAAAAACATCGGCAACTTAACGAAAAAAATTCAAGAAGAAATTGAAA
AAGCATACGATAATACAAAAGATAATTTGCATTTAGTCGATGAAGGTGTAGAAATGAGTGCTGATACAAATGCTAGAATT
GAAAATATTTTAATTATGATTCAAACGTTACAAAACGGTGCTACTAATGTTATTAAAGCTATTGAAAACCAAAAGTCTTG
TAATGATGATATATTACGAGAATTCGCTAATACACAACAAATGTTCCAAAAGTTAAATACTACTATTATGAATCACATTC
ATGATGCTGAGAAAGTCGATGTTCAATTAACGAAAAGTCTTGAAGAAACAGTAGTTTCTCATTAA

Upstream 100 bases:

>100_bases
TTCTTAAATATTTAACAATTCCTATATTTAAAAATTATAAAAGATGCTAAAATCCAAATATAGAGAAAATATAACTTCTA
AAGGCGGTTGAAATAAATAT

Downstream 100 bases:

>100_bases
TAATAAAAATCCCTTATACTGTTATAAGGGATTTTTATTATATTTTGAATATTTATTTCTTCTCAATATTGATCCATATC
TTTGTTATAATGGATAAGTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MFTQKKSLQHKIDQLENRIQELKAELKQKDIEQQETISSIHDRVQNIVQEHKLVNNQHHTLQNLVQQLNSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIEEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILIMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLTKSLEETVVSH

Sequences:

>Translated_314_residues
MFTQKKSLQHKIDQLENRIQELKAELKQKDIEQQETISSIHDRVQNIVQEHKLVNNQHHTLQNLVQQLNSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIEEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILIMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLTKSLEETVVSH
>Mature_314_residues
MFTQKKSLQHKIDQLENRIQELKAELKQKDIEQQETISSIHDRVQNIVQEHKLVNNQHHTLQNLVQQLNSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIEEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILIMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLTKSLEETVVSH

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=71, Percent_Identity=56.3380281690141, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI2367378, Length=146, Percent_Identity=36.3013698630137, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788194, Length=96, Percent_Identity=45.8333333333333, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787690, Length=71, Percent_Identity=57.7464788732394, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=80, Percent_Identity=48.75, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 35670; Mature: 35670

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQKKSLQHKIDQLENRIQELKAELKQKDIEQQETISSIHDRVQNIVQEHKLVNNQHHT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LQNLVQQLNSCFENVSTRTTHSNELNNEMLQKEQSLIQSIEEIIDCSNEGKESVHRLLIV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
INKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTNLLALNASIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCH
AVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH
ENILIMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVD
HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLTKSLEETVVSH
HHHHHHHHHHHCCC
>Mature Secondary Structure
MFTQKKSLQHKIDQLENRIQELKAELKQKDIEQQETISSIHDRVQNIVQEHKLVNNQHHT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LQNLVQQLNSCFENVSTRTTHSNELNNEMLQKEQSLIQSIEEIIDCSNEGKESVHRLLIV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
INKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTNLLALNASIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCH
AVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH
ENILIMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVD
HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLTKSLEETVVSH
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]