Click here to switch to the map view.

The map label for this gene is gerBB [H]

Identifier: 49183626

GI number: 49183626

Start: 651149

End: 652255

Strand: Reverse

Name: gerBB [H]

Synonym: BAS0601

Alternate gene names: 49183626

Gene position: 652255-651149 (Counterclockwise)

Preceding gene: 49183627

Following gene: 49183625

Centisome position: 12.47

GC content: 34.51

Gene sequence:

>1107_bases
GTGACAAACACGCAAAGTAAAATTTCACTTGTTCAATTTACCTTTTTCGTTATTCAATGCCAAATTGGGGTCGGTATACT
TTCTCTACCAAACCGTCTTCATCCGATAGCAAAAGGTGGTGGATGGATTTCCGCTCTCATCGCTGGGCTTGCAATTCAGC
TTATTATTTTACTTATGTGGCTTTTCTTAAAACGATTTCCTGATGCAGATATGTATGAAAGTGTTTGTATGCTATTTGGT
AATAAGTTTGGAAAACTATTAGGCTTTGCTTATGTTTTTTATTTTACTCTTATCGGTATGACGGTTATGTTAAACGCTTG
TAATGTCATTAAAGTATGGGTTTTGCAAGCGACCCCTTGGTACGCAATTCTCTTACTATTTACGATAGCTTGCTGCTATA
TAGCCTATAATACATTTAAAGTCATCGTACGATTTTATGTCATGGCTTCTATTCTCATTTTGCCCATGGCTCTTTTAATT
GCGCTAGGGTTTTCACGAGCTGATTTTTCTTATATTTTTCCAATTACAGAAGCCGGATGGTGGAATATTATTCAAGCATC
AAAAGAAACAATTACAGCTATGTATGGTTTTGAAATTATTCTTATCGCTTTCCCAAAAGTAAACGGGAGTTCTGTAGCCA
AACTAAAAGCAATTTCTATCGCTAACGGATTTGTAACCCTTTTTTATACTTTTACTGTTTGGATTTGCTTTATCGTATTT
AGTCCAAAACAAATTGAGCTTATTCCAGAACCAGTCGCTTACTTATTACGCTCCTTGCATATCGGGATTATAGACCGAAC
TGATTTACTATTCATACCAATTTGGATGATAACAGTTGTAGCTTCTATCGCTAGTTATTACTGCGCTGCTTCTATAGGAA
TTGGACATATATTCAATCTTGCTAATCATAAAAAAGCTGTCCCAATCGTTGGTATTATTGCCTTTAGTGTAGCTTTATTT
ATCGATACACCTGAAGAATTAAAAGTAATTGCAACTTTCACTGATAAGTTCACCTATATTTTCATCGTTGTCCTCCCTCT
TTTATTTCTACTTTATTCAGTAATAAGAAATAAGAAAGGAGAACAGTATGTTCAAAAAAAGAGTTAA

Upstream 100 bases:

>100_bases
TCTTTTGTAAGACTACCAATTTGGTCATTTTGGGAACGACCACATGATCCAAAACCGAAAAAAATGCAACGACAACATGT
AACGAGAGAGGAGGAGGACG

Downstream 100 bases:

>100_bases
ACTACTTTTTATATTATGTACTAGTGCATTCCTTTCTGGCTGCTGGGATCAAGAACCATTAAGGGAAGCAAGGTTAGCTT
ATAGTATTGGATCTGATATT

Product: spore germination protein GerKB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCMLFG
NKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWVLQATPWYAILLLFTIACCYIAYNTFKVIVRFYVMASILILPMALLI
ALGFSRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGSSVAKLKAISIANGFVTLFYTFTVWICFIVF
SPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLANHKKAVPIVGIIAFSVALF
IDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS

Sequences:

>Translated_368_residues
MTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCMLFG
NKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWVLQATPWYAILLLFTIACCYIAYNTFKVIVRFYVMASILILPMALLI
ALGFSRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGSSVAKLKAISIANGFVTLFYTFTVWICFIVF
SPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLANHKKAVPIVGIIAFSVALF
IDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS
>Mature_367_residues
TNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCMLFGN
KFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWVLQATPWYAILLLFTIACCYIAYNTFKVIVRFYVMASILILPMALLIA
LGFSRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGSSVAKLKAISIANGFVTLFYTFTVWICFIVFS
PKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLANHKKAVPIVGIIAFSVALFI
DTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS

Specific function: Involved in the response to the germinative mixture of L-asparagine, glucose, fructose and potassium ions (AGFK). Could be an amino acid transporter. Cannot stimulate germination in the absence of gerD and gerK gene products (fructose and glucose receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41377; Mature: 41246

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMW
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
LFLKRFPDADMYESVCMLFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWVLQATPW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHH
YAILLLFTIACCYIAYNTFKVIVRFYVMASILILPMALLIALGFSRADFSYIFPITEAGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
WNIIQASKETITAMYGFEIILIAFPKVNGSSVAKLKAISIANGFVTLFYTFTVWICFIVF
HHHHHHHHHHHHHHHCEEEEEEEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHC
SPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNL
CCCCEEECCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ANHKKAVPIVGIIAFSVALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKG
HCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQYVQKKS
HHHHHCCC
>Mature Secondary Structure 
TNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMW
CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
LFLKRFPDADMYESVCMLFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWVLQATPW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHH
YAILLLFTIACCYIAYNTFKVIVRFYVMASILILPMALLIALGFSRADFSYIFPITEAGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
WNIIQASKETITAMYGFEIILIAFPKVNGSSVAKLKAISIANGFVTLFYTFTVWICFIVF
HHHHHHHHHHHHHHHCEEEEEEEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHC
SPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNL
CCCCEEECCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ANHKKAVPIVGIIAFSVALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKG
HCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQYVQKKS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8012571; 9384377 [H]