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The map label for this gene is ygaF [H]

Identifier: 49183532

GI number: 49183532

Start: 530347

End: 530811

Strand: Direct

Name: ygaF [H]

Synonym: BAS0504

Alternate gene names: 49183532

Gene position: 530347-530811 (Clockwise)

Preceding gene: 49183531

Following gene: 49183533

Centisome position: 10.14

GC content: 37.42

Gene sequence:

>465_bases
GTGATAACAATGGTTACAGTAGGAGAAATGGCACCGGAATTTACATTAGAGGGAAGTAACGGGGAACAAGTTCGCTTAGC
TGATTTTCGTGGGAAAAATGTAGTTCTATATTTTTATCCGAAAGATATGACTCCAGGGTGTACAACTGAAGCGTGTGATT
TCCGTGATTCTTATGGATTATTTCAAGAGAAGGACACGGTTATTCTTGGAGTGAGTCCGGATCCGGCAAATAGACATTTG
AAATTCATTGAGAAGCATGAACTTCCATTTACACTTTTAGTAGACGAGGATCATAAAGTAGCAGAATTATACGATGTTTG
GAAATTGAAAAAGAACTTTGGGAAAGAGTACATGGGAATTGAGCGCTCTACATTCCTGATTAATAAAGACGGTGAGCTTG
TAAAAGAGTGGCGTAAAGTGAAAGTGAAAGGACATATTGAAGATGTTCTTTCTTATATAAACTAA

Upstream 100 bases:

>100_bases
CGCTAATTGGATATACATTACCGTTTGCTTTCGTGATGAGGTCTGTAATAGACAATGAAAAATAAGATGGCATTTGTTAT
AGTAAAAGAAAAGAATAGGA

Downstream 100 bases:

>100_bases
ATCCATTGTGGAGATAAAATATATAGAAGTAAGGCGAGTGTCTATACATATTTTATTGTCTTACATAAAGTGAAGTGTAG
GGCATACCTCCTCAGATGAT

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MITMVTVGEMAPEFTLEGSNGEQVRLADFRGKNVVLYFYPKDMTPGCTTEACDFRDSYGLFQEKDTVILGVSPDPANRHL
KFIEKHELPFTLLVDEDHKVAELYDVWKLKKNFGKEYMGIERSTFLINKDGELVKEWRKVKVKGHIEDVLSYIN

Sequences:

>Translated_154_residues
MITMVTVGEMAPEFTLEGSNGEQVRLADFRGKNVVLYFYPKDMTPGCTTEACDFRDSYGLFQEKDTVILGVSPDPANRHL
KFIEKHELPFTLLVDEDHKVAELYDVWKLKKNFGKEYMGIERSTFLINKDGELVKEWRKVKVKGHIEDVLSYIN
>Mature_154_residues
MITMVTVGEMAPEFTLEGSNGEQVRLADFRGKNVVLYFYPKDMTPGCTTEACDFRDSYGLFQEKDTVILGVSPDPANRHL
KFIEKHELPFTLLVDEDHKVAELYDVWKLKKNFGKEYMGIERSTFLINKDGELVKEWRKVKVKGHIEDVLSYIN

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=149, Percent_Identity=43.6241610738255, Blast_Score=134, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI193204376, Length=137, Percent_Identity=35.036496350365, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI32565831, Length=137, Percent_Identity=35.036496350365, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322180, Length=147, Percent_Identity=29.2517006802721, Blast_Score=64, Evalue=7e-12,
Organism=Drosophila melanogaster, GI17738015, Length=142, Percent_Identity=33.0985915492958, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17784; Mature: 17784

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMVTVGEMAPEFTLEGSNGEQVRLADFRGKNVVLYFYPKDMTPGCTTEACDFRDSYGL
CEEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
FQEKDTVILGVSPDPANRHLKFIEKHELPFTLLVDEDHKVAELYDVWKLKKNFGKEYMGI
CCCCCEEEEEECCCCCCHHHHHHECCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHCCC
ERSTFLINKDGELVKEWRKVKVKGHIEDVLSYIN
CCEEEEEECCHHHHHHHHHEEECCCHHHHHHHCC
>Mature Secondary Structure
MITMVTVGEMAPEFTLEGSNGEQVRLADFRGKNVVLYFYPKDMTPGCTTEACDFRDSYGL
CEEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
FQEKDTVILGVSPDPANRHLKFIEKHELPFTLLVDEDHKVAELYDVWKLKKNFGKEYMGI
CCCCCEEEEEECCCCCCHHHHHHECCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHCCC
ERSTFLINKDGELVKEWRKVKVKGHIEDVLSYIN
CCEEEEEECCHHHHHHHHHEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]