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The map label for this gene is ycdQ [C]

Identifier: 49183504

GI number: 49183504

Start: 497968

End: 499572

Strand: Direct

Name: ycdQ [C]

Synonym: BAS0476

Alternate gene names: 49183504

Gene position: 497968-499572 (Clockwise)

Preceding gene: 49183503

Following gene: 49183505

Centisome position: 9.52

GC content: 35.76

Gene sequence:

>1605_bases
TTGTACGTATTCCTGTTATTGCCTATGTTCGCTTGGAAGGGTAAGCGTGATAAAAGTATGAAAGTATCAGTTGTTATTCC
AGTGCATAATGAGGCAAGTACTTTATCAAAAGTTTTAGCAGAAGTAAAAAAGTTAGAACCATATGAAATTATCATAGTAG
ATAATGGATCGACCGATGGGACAAAAGAAATAGCATTACAACATCATTGCCGTGTGATTTATTATAATCATTCTCTTGGT
AATGATGTGGGACGGGCAATTGGCGCTAGAGAAGCAAAAGGTGAAATTGTCTTATTTTTAGACGGTGATATCGTCATGAA
AAGTGAAGAATTATATCCTTTTATTAAAGGAATACAGCAAGGACATCAAATTGTTTTGAATAACTTAACATGGTCTGTTT
ATTTAAAAGTACGACCGCATTATACGACGGTTGGAAAATATATGTTAAATCGTTATTTGAACAAGAAAGAATTTGTTGTA
GGGTCTTTAATTGCGATACCACATGCAATTAGTCGTGAAGTGATTGAAAAACTGGGGTGGTGGAATTTAGCAGATCCAGC
ATTATTTCAAGCGATGGCGATGTCTAGAGGAGTAGATATTTCAGATATGGCTTCAGTTGATGTAATATACACAAATAAAG
TTCGTCCTGTTCATACGGGCACATCACCTGATTCTCCTTATCCTAAAGCGACTAGTCGTATTATGGGCGATCATTTACGT
GCTTTGCAATATATAACTGAAACATATGGTAAACGCGGTGGTTTTTCGGAGGGAAATAGAGATAGAGAGTTTATAGGGAA
ATATAAACCAGTTGTATTAAAAAAGGAAAAAGCGAAATACAGTGCGATTATACCAGTGTCAGAAGAAAAAACGACTATAA
GATCTGTTATACAAGAAGTAAAAAAAGCAGGAGTAGATGAAATTATTATTGTTGCGAATGGAGCAGATATTGAGACTATT
AAACAAGTAAACCTAGAGAATGTTATTGTTGTTGAAGTTACGAAGACGCTTGGAAACAATGTAGCACGAGCGATAGGTGC
CATGCATGCTACAGCAGAGATTTGTTTATTCGTTGATGGAGATTATGCTATTCCGGCAAAAAAACTAGTTCCATTTTTGC
GTGCTATTGAAGATGGAAGTGATATGGCATTAAATGATTTGCAGTGTTTATTAGATATATTTCATCCAGCAGATCCAATT
AGTATGGGAAAATACTTTGTGAATTTGGTAGCGAAACGACCAGATTTATGGAATAACTCACTAACAGCAGTACCACATGC
CATCCGTAAGAAGGTAATAGAGAAAATAGGATATGACTCTCTTATCATTCCGCCATTAGCACAAATGAAAGCTATTTTAG
AAGGGTTCTCTATTACAACCGTTGAGTTTGTAGATGTTATAAAAACAAATCGAGTACGTCCAGAGCAACATGAATTTGTA
AATGGGCGCATTTCAGCATTTGACCGTATTTTCGGTGACCAACTTGAGGCGATTGCATATTTATTACAACATACAGACGA
ACGCGGAGGTTTTACAGATGGAGATAGAGATAGAGAAATAATTCAACAATTGAGAAGGGAAGAAGAGAATACAAATGAAT
ACTAG

Upstream 100 bases:

>100_bases
GTGACTGCTGTTGAAATCGTTTCAGGTGTGCTTTTATCTGTGACAGATGGAGCAGTAAGCGTTCGTACTTCTCCTTCCTA
TGGACCACCGGAAGATGTAA

Downstream 100 bases:

>100_bases
TCGTAAAGTAGCTATCATTGGATTAGGGTATGTTGGTCTTCCTTTAGCGGTCCATCTTGCAGAAAGGGGCCATACTGTAC
TTGGACTAGACAAAGATACT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Sugar Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MYVFLLLPMFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLG
NDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVV
GSLIAIPHAISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLR
ALQYITETYGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETI
KQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPI
SMGKYFVNLVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFV
NGRISAFDRIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY

Sequences:

>Translated_534_residues
MYVFLLLPMFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLG
NDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVV
GSLIAIPHAISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLR
ALQYITETYGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETI
KQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPI
SMGKYFVNLVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFV
NGRISAFDRIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
>Mature_534_residues
MYVFLLLPMFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLG
NDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVV
GSLIAIPHAISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLR
ALQYITETYGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETI
KQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPI
SMGKYFVNLVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFV
NGRISAFDRIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60041; Mature: 60041

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVFLLLPMFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDG
CEEEEEEHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
TKEIALQHHCRVIYYNHSLGNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQ
HHHHHHHHCEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHC
GHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISREVIEKLGW
CCEEEEECCEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
WNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLR
CCCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH
ALQYITETYGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEV
HHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHH
KKAGVDEIIIVANGADIETIKQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDG
HHCCCCEEEEEECCCCHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCEEEEEEEECC
DYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVNLVAKRPDLWNNS
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
LTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFV
HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH
NGRISAFDRIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYVFLLLPMFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDG
CEEEEEEHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
TKEIALQHHCRVIYYNHSLGNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQ
HHHHHHHHCEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHC
GHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISREVIEKLGW
CCEEEEECCEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
WNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLR
CCCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH
ALQYITETYGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEV
HHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHH
KKAGVDEIIIVANGADIETIKQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDG
HHCCCCEEEEEECCCCHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCEEEEEEEECC
DYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVNLVAKRPDLWNNS
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
LTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFV
HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH
NGRISAFDRIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA