Click here to switch to the map view.

The map label for this gene is 49183408

Identifier: 49183408

GI number: 49183408

Start: 412289

End: 413602

Strand: Reverse

Name: 49183408

Synonym: BAS0380

Alternate gene names: NA

Gene position: 413602-412289 (Counterclockwise)

Preceding gene: 49183411

Following gene: 49183407

Centisome position: 7.91

GC content: 36.83

Gene sequence:

>1314_bases
ATGGATAAAGCATTAACGAATCGTGTCATCATTTTATCATTCGACTGTTTATCAGCTTTAGATTTTCCTATACTACAAAA
ATTACCTCACTTCCAATCTCTAATCAAAAAGGGCACGGTTGTCGAAAAAGTAGAACCAATTTATCCTTCTGTAACATACC
CAAGTCACTCAACAATCGTTACTGGAAACTATCCTAATAAACATGGCGTAGTTAGCAATACGTTACTTCAACCTGGGCGC
GAGTCACCAGATTGGCATTGGTACCGAAAATCCATTAAAGGAACAACGTTATACGATGAAGCACATAAAGCAAATTTAAC
GACAGCTGCTCTTCTATGGCCTGTTACCGGCAGAGCAAATATTGATTACAATTTACCAGAAATCTTTCCAAATAGGCCGT
GGCAAAATCAAGTTTTAGTTTCATTATTTAGCGGTAGCCCGCTATATCAATTAGATTTGAATCGTCGTTTCGGCCATATA
CGAAATGGGCTGTCACAACCTGAACTCGATGATTTCGTACTTGCTTCTGCTGTGCATACAATCCAGACGAAAAAGCCTAA
TGTTATGTTCGTACATTTCACTGATTTAGACACCCAAAGACACTATCATGGCTTTGAATCCAAAGAAACAATAGCTGCAA
TTCATAGACATGATGAGCGGCTAGGGCAAATTATTCAAGCTTTAAAAGACAGTGATCTATACGAAGAGAGTACAATTATC
GCTCTTGGTGACCATAGCGCTTTAAGTGAAAACAAAGCCATTCAATTAAATGTACTATTTCATCAAAAAGGGCTTATATC
TGTAAATTCAAAAGGAAATTTAGTAGATTGGAAAGTCTATTGCCAAAGTTGTGACGGCTCTGCCTATGTATATGTGAAGG
ACAAAAATGATACGGATACAATTCGGGAGGTACAACTACTCCTTGAAGAACTACTTCAACATAAACAAAACGGAATTGAA
TTTATACTTCATGATGAAGATGCGAAGGAATGTGGTGCAGATGGTAATTGTTTATTTATGTTAGAAGCGCGAGAAGGATA
TTATTTCACTGAAAACTATACAGGAGATTTTATAAAAGAAATTACTGAAAAAGATGTTACGCCTAGTAAAAAATATACAT
TTGGTACGCATGGATACTCTCCAACAAAACCTAACTATGAAACAATTTTTATAGCTGCTGGGAAAGGGATAAAAAGCGGC
GTTACCATTCCGTATATGAGACTTATTGATGAAAGCCCAACTATCGCTAGACTACTCGGTTTACACTTAGGTGAAACAGA
CGGATCAATTGTAGAGGATTTACTCCAATTGTAA

Upstream 100 bases:

>100_bases
TGAAAATAAATAATGAATTTTATTCAAAAACATATTTTTATTACTAGGTATTAATAGTAATATATAGTAATAGGTTTTAT
ATGATTAGGAGGATTACTTT

Downstream 100 bases:

>100_bases
AGAACTGTGTATATATGTAAAAGTTATGTAAAAATCATCACTGTTTCTCTTTTTATAATTTTTATTTTTGTACACTGTTA
GTAGAACTAATTTAAGGGGG

Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein

Products: NA

Alternate protein names: Nucleotide Pyrophosphatase; Pyrophosphatase; Phosphodiesterase; Phosphoglyceromutase/Phosphopentomutase; Alkaline Phosphodiesterase I; AP Endonuclease; Phosphodiesterase/Nucleotide Pyrophosphatase Family Protein; Hydrolase; Nucleotide Diphosphatase

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEAHKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGQIIQALKDSDLYEESTII
ALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVDWKVYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQHKQNGIE
FILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
VTIPYMRLIDESPTIARLLGLHLGETDGSIVEDLLQL

Sequences:

>Translated_437_residues
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEAHKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGQIIQALKDSDLYEESTII
ALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVDWKVYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQHKQNGIE
FILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
VTIPYMRLIDESPTIARLLGLHLGETDGSIVEDLLQL
>Mature_437_residues
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEAHKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGQIIQALKDSDLYEESTII
ALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVDWKVYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQHKQNGIE
FILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
VTIPYMRLIDESPTIARLLGLHLGETDGSIVEDLLQL

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI170650661, Length=227, Percent_Identity=25.1101321585903, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115533130, Length=440, Percent_Identity=21.1363636363636, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115533132, Length=440, Percent_Identity=21.1363636363636, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49397; Mature: 49397

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIV
CCCCCCCCEEEEEEHHHHHCCCHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEE
TGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIKGTTLYDEAHKANLTTAALLWPVTGRAN
ECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCEEECCHHHCCCEEEEEEEECCCCCC
IDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHIRNGLSQPELDDFVLASAVHT
CCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHH
IQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGQIIQALKDSDLYEESTII
HCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVDWKVYCQSCDGSAYVYVKDKNDTDT
EECCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHH
IREVQLLLEELLQHKQNGIEFILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKE
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEEECCCEEEECCCCHHHHHH
ITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSGVTIPYMRLIDESPTIARLLG
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHH
LHLGETDGSIVEDLLQL
HHCCCCCCHHHHHHHHC
>Mature Secondary Structure
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIV
CCCCCCCCEEEEEEHHHHHCCCHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEE
TGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIKGTTLYDEAHKANLTTAALLWPVTGRAN
ECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCEEECCHHHCCCEEEEEEEECCCCCC
IDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHIRNGLSQPELDDFVLASAVHT
CCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHH
IQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGQIIQALKDSDLYEESTII
HCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVDWKVYCQSCDGSAYVYVKDKNDTDT
EECCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHH
IREVQLLLEELLQHKQNGIEFILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKE
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEEECCCEEEECCCCHHHHHH
ITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSGVTIPYMRLIDESPTIARLLG
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHH
LHLGETDGSIVEDLLQL
HHCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA