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The map label for this gene is ydcC [H]

Identifier: 49183270

GI number: 49183270

Start: 238590

End: 239603

Strand: Direct

Name: ydcC [H]

Synonym: BAS0237

Alternate gene names: 49183270

Gene position: 238590-239603 (Clockwise)

Preceding gene: 49183269

Following gene: 49183271

Centisome position: 4.56

GC content: 36.39

Gene sequence:

>1014_bases
ATGAAAAGGCGTCTGTTTTTAGTTCTTGTCGGTTTATTAACCGTTTTTGTGTTGGCCGGTTGTATGGAAAAGAAACAAGA
TGATGTTGTGAGAGATTTAGAGGCGAAAGTAAAAGGGTTGAAAAGCTATCAAGCTGAAGCGAAATTATCTATTAAAACAG
GGAATGAGCCTCAGGAGTATAAGGTAGAAATATGGCATAAGGAACCTTCGTTTTATCGTGTGAATTTGCAGAATGCGAAA
AAAGATCAAAGTCAAATTATTTTAAGAAATGAAGAAGGAGTATTTGTATTAACGCCAGCTCTTAATAAGAGTTTTCGTTT
CCAAAGTGATTGGCCGCAAAATAGTAGCCAGGCTTATTTATACGAATCGCTTGTGAGAGATATTTTACAGGATAAGAAAA
ACCTTACTTTTGAAAAAACAGATAAGCATTATATTTTTAAAACAAAAACAAACTATCAGCATCAAAACATGTTGCCGAGA
CAAGAGATTACGTTGAAGAAAAGTGATTTAACGCCAGTTTCGGTGAAGTTAATGGATAATGATCAAAATGTTCTTGTGAA
AGTAGATTTCTCTAAAGTGAAATTCGACGCGAAATTTGATAAAGGTGCATTTGATACGAAACAAAATATGTCTAGAGCGC
AAGTAGATGTTCAAACAACAGCGAAAGAAGACAAACCGTTTGCTATTTTATATCCACGTGATACGCCACAAGGTATGACT
TTGAAAGATGAAAAAGAGTTGAAGACAGACAGTGGCAAGCGTGCAATACTCACATACACTGGAAGTAAGAAATCCTTTAC
TTTAATACAAGAAAAGGCAAAAGTTGCAGAGGCTTCGTCAGCAATAAGTGTGAGCGGAGAATTGGTTGATCTTGGCTTTA
CAATTGGAGCATTGACGAAAGACTCTTTAACGTGGTCGCATAACGGAGTAGAATATATGCTCGTGTCTAAAGGTTTAGAG
CCGAAGGAGCTATTAATGGTTGCTCGTTCAGTTACAGAGAAGCAAGTGAAGTAA

Upstream 100 bases:

>100_bases
AAGCTAGTCTGCATATTTTATATCTTTGTCTCATATATTTGTGGTAGCGATAAGGAAGGTACATCTTCCATTCATTTATA
GGGGCAAAGGGGCTGAAGTG

Downstream 100 bases:

>100_bases
ACTTCTTAGACGTGGTGATATATGTGCACCACGTCTTTTCTTAGTTTGAAGGGTGGATTTCATAAAAGAAGCATATAAAA
GAATAAGCTTCGCATATCGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQAEAKLSIKTGNEPQEYKVEIWHKEPSFYRVNLQNAK
KDQSQIILRNEEGVFVLTPALNKSFRFQSDWPQNSSQAYLYESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPR
QEITLKKSDLTPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQTTAKEDKPFAILYPRDTPQGMT
LKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVAEASSAISVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGLE
PKELLMVARSVTEKQVK

Sequences:

>Translated_337_residues
MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQAEAKLSIKTGNEPQEYKVEIWHKEPSFYRVNLQNAK
KDQSQIILRNEEGVFVLTPALNKSFRFQSDWPQNSSQAYLYESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPR
QEITLKKSDLTPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQTTAKEDKPFAILYPRDTPQGMT
LKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVAEASSAISVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGLE
PKELLMVARSVTEKQVK
>Mature_337_residues
MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQAEAKLSIKTGNEPQEYKVEIWHKEPSFYRVNLQNAK
KDQSQIILRNEEGVFVLTPALNKSFRFQSDWPQNSSQAYLYESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPR
QEITLKKSDLTPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQTTAKEDKPFAILYPRDTPQGMT
LKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVAEASSAISVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGLE
PKELLMVARSVTEKQVK

Specific function: required for efficient sporulation [H]

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38451; Mature: 38451

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQAEAKLSIKTGNEPQEY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE
KVEIWHKEPSFYRVNLQNAKKDQSQIILRNEEGVFVLTPALNKSFRFQSDWPQNSSQAYL
EEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
YESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPRQEITLKKSDLTPVSVKLMDN
HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCHHCCCCCHHEEEEECCCCEEEEEEEEC
DQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQTTAKEDKPFAILYPRDTPQGMT
CCEEEEEEEHHHEEEECCCCCCCCCCHHCCCHHEEEEEECCCCCCCEEEEECCCCCCCCC
LKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVAEASSAISVSGELVDLGFTIGALTK
CCCCHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHCCCEEEECCEEEEEEEEEECEEC
DSLTWSHNGVEYMLVSKGLEPKELLMVARSVTEKQVK
CCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQAEAKLSIKTGNEPQEY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE
KVEIWHKEPSFYRVNLQNAKKDQSQIILRNEEGVFVLTPALNKSFRFQSDWPQNSSQAYL
EEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
YESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPRQEITLKKSDLTPVSVKLMDN
HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCHHCCCCCHHEEEEECCCCEEEEEEEEC
DQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQTTAKEDKPFAILYPRDTPQGMT
CCEEEEEEEHHHEEEECCCCCCCCCCHHCCCHHEEEEEECCCCCCCEEEEECCCCCCCCC
LKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVAEASSAISVSGELVDLGFTIGALTK
CCCCHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHCCCEEEECCEEEEEEEEEECEEC
DSLTWSHNGVEYMLVSKGLEPKELLMVARSVTEKQVK
CCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]