Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ddl [H]
Identifier: 49183263
GI number: 49183263
Start: 232006
End: 232482
Strand: Direct
Name: ddl [H]
Synonym: BAS0230
Alternate gene names: 49183263
Gene position: 232006-232482 (Clockwise)
Preceding gene: 49183262
Following gene: 49183264
Centisome position: 4.44
GC content: 35.64
Gene sequence:
>477_bases GTGACAAAAATTAAATTAGGTTTATTATATGGTGGAAAATCAGCTGAGCATCAAGTTTCGTTACAAACGGCTCTTGCTGC TATTAAAGCATTAAATCAAGATAAATTCGAGATTCATCCAATTTATATTACAGAACAAGGTCAATGGATACGCGGTGAAC GTATTGAAGGTGAAGTAGCAAATGTTGAAGTTCTAAAAATGAGCGGTGCAGAAAATGCGATTTCTCCGTTATCTTTAAGC ACAGAAATCATTCCATCTGCAAATGCTGAGGAAAATGCTATCGACGTTATTTTCCCATTACTACATGGACCAAATGGTGA AGATGGAACGGTTCAAGGTTTATTAGAATTAATGAACATTCCTTATGTAGGAAATGGTGTTCTAGCATCTGCTGCTGGTA TGGATAAAGTTGTTATGAAAAACATTTTCGCAGAAGCTGGATTAAAAACAAGCGAAATATGCATCATTCATTCGTAG
Upstream 100 bases:
>100_bases ATTATTTGTGGAAGTTACATTTTATTTCAAATAGGAACTACCTATTTTTATAAAAAGTGCTAAAATAGAAAAATGAAAAC AATTGGTTAGGGTGATTTCA
Downstream 100 bases:
>100_bases CGGATGGGAAAAAGATCGTGAAACAGCATATGAAAAAGTAGAAGAAGTATTAGGATACCCTTGCTTCGTAAAACCAGCAA ACCTTGGTTCAAGTGTTGGG
Product: D-alanine-D-alanine ligase, N-terminus
Products: NA
Alternate protein names: D-Ala-D-Ala ligase; D-alanylalanine synthetase [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYITEQGQWIRGERIEGEVANVEVLKMSGAENAISPLSLS TEIIPSANAEENAIDVIFPLLHGPNGEDGTVQGLLELMNIPYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS
Sequences:
>Translated_158_residues MTKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYITEQGQWIRGERIEGEVANVEVLKMSGAENAISPLSLS TEIIPSANAEENAIDVIFPLLHGPNGEDGTVQGLLELMNIPYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS >Mature_157_residues TKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYITEQGQWIRGERIEGEVANVEVLKMSGAENAISPLSLST EIIPSANAEENAIDVIFPLLHGPNGEDGTVQGLLELMNIPYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS
Specific function: Cell wall formation [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786579, Length=154, Percent_Identity=39.6103896103896, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1786280, Length=144, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR000291 - InterPro: IPR005905 - InterPro: IPR011095 - InterPro: IPR011127 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF07478 Dala_Dala_lig_C; PF01820 Dala_Dala_lig_N [H]
EC number: =6.3.2.4 [H]
Molecular weight: Translated: 16881; Mature: 16749
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00843 DALA_DALA_LIGASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYITEQGQWIRGERIEGEVA CCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCEEC NVEVLKMSGAENAISPLSLSTEIIPSANAEENAIDVIFPLLHGPNGEDGTVQGLLELMNI CEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCC PYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS CCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure TKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYITEQGQWIRGERIEGEVA CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCEEC NVEVLKMSGAENAISPLSLSTEIIPSANAEENAIDVIFPLLHGPNGEDGTVQGLLELMNI CEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCC PYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS CCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA